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Mito Communication

Characterization of the complete chloroplast genome sequence of Ulmus chenmoui (Ulmaceae), an endangered plant endemic to China

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Pages 482-484 | Received 21 Sep 2018, Accepted 20 Oct 2018, Published online: 11 Jan 2019

References

  • Fu SL, Liu SQ. 2001. Drought-relief characters of several species on limestone area. J Soil Water Conserv. 19:11–15.
  • Geng QF, He J, Yang J, Shi E, Wang DB, Xu WX, Jeelani N, Wang ZS, Liu H. 2016. Development and characterization of microsatellite markers for Ulmus chenmoui (Ulmaceae), an endangered tree endemic to eastern China. Genet Mol Res GMR. 15:1–7.
  • Han X, Zhi YB, Zhou ZZ, Sun ZY, Yang SB, Chen QN, Li JM. 2010. Study on pollen morphology and its geohistoric significance of two endangered elms peculiar to Mt. Langya, China. Acta Micropalaeontol Sin. 27:77–84.
  • Hao RM, Huang ZY, Liu XJ, Wang ZL, Xu HQ, Yao ZG. 2000. The natural distribution and characteristics of the rare and endangered plants in Jiangsu, China. Chin Biodivers. 8:153–162.
  • Liu L, Chen W, Yan DT, Li J, Liu L, Wang YL. 2017. Molecular phylogeography and paleodistribution modeling of the boreal tree species Ulmus lamellosa (T. Wang et SL Chang) (Ulmaceae) in China. Tree Genet Genomes. 13:11.
  • Lohse M, Drechsel O, Bock R. 2007. OrganellarGenomeDRAW (OGDRAW): a tool for the easy generation of high-quality custom graphical maps of plastid and mitochondrial genomes. Curr Genet. 52:267–274.
  • Malé PG, Bardon L, Besnard G, Coissac E, Delsuc F, Engel J, Lhuillier E, Scottisaintagne C, Tinaut A, Chave J. 2014. Genome skimming by shotgun sequencing helps resolve the phylogeny of a pantropical tree family. Mol Ecol Res. 14:966–975.
  • Miller MA, Pfeiffer W, Schwartz T. (2010) Creating the CIPRES Science Gateway for inference of large phylogenetic trees. In: Gateway Computing Environments Workshop (GCE). New Orleans, LA: IEEE; p.1–8.
  • The Angiosperm Phylogeny Group, 2016. An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG IV. Bot J Linn Soc. 181:1–20.
  • Wyman SK, Jansen RK, Boore JL. 2004. Automatic annotation of organellar genomes with DOGMA. Bioinformatics. 20:3252–3255.
  • Yang JB, Li DZ, Li HT. 2014. Highly effective sequencing whole chloroplast genomes of angiosperms by nine novel universal primer pairs. Mol Ecol Res. 14:1024–1031. doi:10.1111/1755-0998.12251
  • Yu H, Tardivo L, Tam S, Weiner E, Gebreab F, Fan C, Svrzikapa N, Hirozane-Kishikawa T, Rietman E, Yang X, et al. 2011. Next-generation sequencing to generate interactome datasets. Nat Methods. 8:478–480.
  • Zuo LH, Shang AQ, Zhang S, Yu XY, Ren YC, Yang MS, Wang JM. 2017. The first complete chloroplast genome sequences of Ulmus species by de novo sequencing: genome comparative and taxonomic position analysis. PloS One. 12:e0171264.