Advanced search
Publication Cover
Mitochondrial DNA Part B
Resources
Volume 4, 2019 - Issue 1
Submit an article Journal homepage
931
Views
0
CrossRef citations to date
0
Altmetric
Mito Communication

Long-read sequencing of benthophilinae mitochondrial genomes reveals the origins of round goby mitogenome re-arrangements

Silvia GutnikBiozentrum, Department Growth & Development, University of Basel, Basel, Switzerland;
,
Jean-Claude WalserGenetic Diversity Centre Zurich, ETH Zurich, Zurich, Switzerland;
&
Irene Adrian-KalchhauserProgram Man-Society-Environment, Department of Environmental Sciences, University of Basel, Basel, SwitzerlandCorrespondence[email protected]
Pages 408-412 | Received 07 Sep 2018, Accepted 02 Nov 2018, Published online: 08 Jan 2019

References

  • Adrian-Kalchhauser I, Svensson O, Kutschera VE, Alm Rosenblad M, Pippel M, Winkler S, Schloissnig S, Blomberg A, Burkhardt-Holm P. 2017. The mitochondrial genome sequences of the round goby and the sand goby reveal patterns of recent evolution in gobiid fish. BMC Genomics. 18:177.
  • De Coster W, D'Hert S, Schultz DT, Cruts M, Van Broeckhoven C. 2018. NanoPack: visualizing and processing long-read sequencing data . Bioinformatics. 34:2666–2669.
  • Hirsch PE, N'Guyen A, Adrian-Kalchhauser I, Burkhardt-Holm P. 2015. What do we really know about the impacts of one of the 100 worst invaders in Europe? A reality check. Ambio. 45(3):267–279.
  • Kornis MS, Mercado-Silva N, Vander Zanden MJ. 2012. Twenty years of invasion: a review of round goby Neogobius melanostomus biology, spread and ecological implications. J Fish Biol. 80:235–285.
  • Medvedev DA, Sorokin PA, Vasil’ev VP, Chernova NV, Vasil’eva ED. 2013. Reconstruction of phylogenetic relations of Ponto-Caspian gobies (Gobiidae, Perciformes) based on mitochondrial genome variation and some problems of their taxonomy. J Ichthyol. 53:702–712.
  • Meyer S, Weiss G, von Haeseler A. 1999. Pattern of nucleotide substitution and rate heterogeneity in the hypervariable regions I and II of human mtDNA. Genetics. 152:1103–1110.
  • Neilson ME, Stepien CA. 2009a. Escape from the Ponto-Caspian: evolution and biogeography of an endemic goby species flock (Benthophilinae: Gobiidae: Teleostei). Mol Phylogenet Evol. 52:84–102.
  • Neilson ME, Stepien CA. 2009b. Evolution and phylogeography of the tubenose goby genus Proterorhinus (Gobiidae: Teleostei): evidence for new cryptic species. Biol J Linnean Soc. 96:664–684.
  • Robinson JT, Thorvaldsdóttir H, Winckler W, Guttman M, Lander ES, Getz G, Mesirov JP. 2011. Integrative genomics viewer. Nat Biotechnol. 29:24–26.
  • Roche KF, Janac M, Jurajda P. 2013. A review of Gobiid expansion along the Danube-Rhine corridor - geopolitical change as a driver for invasion. Knowl Manag Aquat Ecosyst. 411:01.
  • Stoneking M. 2000. Hypervariable sites in the mtDNA control region are mutational hotspots. Am J Human Genet. 67:1029–1032.
  • Thorvaldsdottir H, Robinson JT, Mesirov JP. 2013. Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration . Brief Bioinform. 14:178–192.

Related research

People also read lists articles that other readers of this article have read.

Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.

Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.