968
Views
9
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

Complete chloroplast genome sequence of the Salix koriyanagi Kimura ex Goerz (Salicaceae)

, ORCID Icon & ORCID Icon
Pages 549-550 | Received 04 Nov 2018, Accepted 18 Nov 2018, Published online: 15 Jan 2019

References

  • Argus GW. 1997. Infrageneric classification of Salix (Salicaceae) in the new world. Vol. 52, Syst Botany Monographs. 52:1–121.
  • Bolger AM, Lohse M, Usadel B. 2014. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics. 30:2114–2120.
  • Jin B. 2010. Analysis of the DNA barcode marker variation of Salix species in South Korea. Daegu (Korea): Daegu University.
  • Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30:772–780.
  • Kumar S, Stecher G, Li M, Knyaz C, Tamura K. 2018. MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms. Mol Biol Evol. 35:1547–1549.
  • Lauron-Moreau A, Pitre FE, Argus GW, Labrecque M, Brouillet L. 2015. Phylogenetic relationships of American willows (Salix L., Salicaceae). PloS One. 10:e0121965
  • Lee TB. 2003. Coloured flora of Korea.Hyang Mun Sa. Seoul. Korea.
  • Li H. 2013. Aligning sequence reads, clone sequences and assembly contigs with BWA-MEM. arXiv preprint arXiv:13033997.
  • Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R. 2009. The sequence alignment/map format and SAMtools. Bioinformatics. 25:2078–2079.
  • Wu Z. 2015. The new completed genome of purple willow (Salix purpurea) and conserved chloroplast genome structure of Salicaceae. J Nat Sci. 1:e49.
  • Wu Z. 2016. The whole chloroplast genome of shrub willows (Salix suchowensis). Mitochondrial DNA Part A. 27:2153–2154.
  • Wu Z, Raven P. 1999. Flora of China. Vol. 4. Science.China.
  • Zerbino DR, Birney E. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18:821–829.
  • Zhao QY, Wang Y, Kong YM, Luo D, Li X, Hao P. 2011. Optimizing de novo transcriptome assembly from short-read RNA-Seq data: a comparative study. BMC Bioinformatics. 12:S2.