http://orcid.org/0000-0002-3288-482X
References
- Bolger AM, Lohse M, Usadel B. 2014. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics. 30:2114–2120.
- Bolton B. 2018 An online catalog of the ants of the world. Available from http://antcat.org (accessed 2018 May 03).
- Bonasio R, Zhang G, Ye C, Mutti NS, Fang X, Qin N, Donahue G, Yang P, Li Q, Li C, et al. 2010. Genomic comparison of the ants Camponotus floridanus and Harpegnathos saltator. Science. 329:1068–1071.
- Borowiec ML, Rabeling C, Brady SG, Fisher BL, Schultz TR, Ward PS. 2017. Compositional heterogeneity and outgroup choice influence the internal phylogeny of the ants. bioRxiv.173393.https://www.biorxiv.org/content/early/2017/08/08/173393
- Group JAD, Imai HT. 2003. Ants of Japan. Japan: Gakken.
- Kumar S, Stecher G, Li M, Knyaz C, Tamura K. 2018. MEGA X: molecular evolutionary genetics analysis across computing platforms. Mol Biol Evol. 35:1547–1549.
- Laslett D, Canbäck B. 2008. ARWEN: a program to detect tRNA genes in metazoan mitochondrial nucleotide sequences. Bioinformatics. 24:172–175.
- Li H. 2013. Aligning sequence reads, clone sequences and assembly contigs with BWA-MEM. arXiv preprint arXiv:13033997.
- Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R. 2009. The sequence alignment/map format and SAMtools. Bioinformatics. 25:2078–2079.
- Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, et al. 2015. Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies. Proc Natl Acad Sci. 112:13970–13975.
- Schmidt CA, Shattuck SO. 2014. The higher classification of the ant subfamily Ponerinae (Hymenoptera: Formicidae), with a review of ponerine ecology and behavior. Zootaxa. 3817:1–242.
- Thompson JD, Gibson TJ, Higgins DG. 2003. Multiple sequence alignment using ClustalW and ClustalX. Curr Protoc Bioinformatics.2.3.1-2.3.22. https://currentprotocols.onlinelibrary.wiley.com/doi/pdf/10.1002/0471250953.bi0203s00
- Zerbino DR, Birney E. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18:821–829.
- Zhao Q-Y, Wang Y, Kong Y-M, Luo D, Li X, Hao P. 2011. Optimizing de novo transcriptome assembly from short-read RNA-Seq data: a comparative study. BMC Bioinformatics. 2011. 12:S2.