884
Views
17
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

The complete mitochondrial genome of Korean Marchantia polymorpha subsp. ruderalis Bischl. & Boisselier: inverted repeats on mitochondrial genome between Korean and Japanese isolates

ORCID Icon, ORCID Icon & ORCID Icon
Pages 769-770 | Received 13 Dec 2018, Accepted 23 Dec 2018, Published online: 08 Feb 2019

References

  • Bowman JL, Kohchi T, Yamato KT, Jenkins J, Shu S, Ishizaki K, Yamaoka S, Nishihama R, Nakamura Y, Berger F. 2017. Insights into land plant evolution garnered from the Marchantia polymorpha genome. Cell. 171(2):287–304.e215.
  • Crandall-Stotler BJ, Hart ML, Long DG, Forrest LL. 2016. Divergence times and the evolution of morphological complexity in an early land plant lineage (Marchantiopsida) with a slow molecular rate. New Phytologist. 209(4):1734–1746.
  • KatohK, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30(4):772–780.
  • Kijak H, Kisiel K, Miwa H, Cieślewicz A, Odrzykoski IK. 2013. What has actually been sequenced? The organellar genome sequences of Marchantia polymorpha from NCBI GeneBank fit M. paleacea subsp. diptera rather than M. polymorpha sensu lato. IAB Conference, The Natural History Museum, London, UK.
  • Kisel K, Miwa H, Odrzykoski IJ. 2011. Taxonomic identification of chloroplast genome of Marchantia polymorpha using DNA barcode sequences. In Fourth International Barcode of Life Conference.
  • Kumar S, Stecher G, Li M, Knyaz C, Tamura K. 2018. MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms. Mol Biol Evol. 35(6):1547–1549.
  • Li H. 2013. Aligning sequence reads, clone sequences and assembly contigs with BWA-MEM. arXiv preprint arXiv:1303.3997. https://doi.org/10.1080/23802359.2018.1551091
  • Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R. 2009. The sequence alignment/map format and SAMtools. Bioinformatics. 25(16):2078–2079.
  • Myszczyński K, Bączkiewicz A, Buczkowska K, Ślipiko M, Szczecińska M, Sawicki J. 2017. The extraordinary variation of the organellar genomes of the Aneura pinguis revealed advanced cryptic speciation of the early land plants. Sci Rep. 7(1):9804.
  • Oda K, Yamato K, Ohta E, Nakamura Y, Takemura M, Nozato N, Akashi K, Kanegae T, Ogura Y, Kohchi T. 1992. Gene organization deduced from the complete sequence of liverwort Marchantia polymorpha mitochondrial DNA: a primitive form of plant mitochondrial genome. J Mol Biol. 223(1):1–7.
  • Zerbino DR, Birney E. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18(5):821–829.