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Mitochondrial DNA Part B
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Volume 4, 2019 - Issue 1
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Mitogenome Announcement

The complete chloroplast genomes of the evergreen tree species Cinnamomum camphora and Cinnamomum parthenoxylon (Laurales: Lauraceae)

Yi WuCollege of Life Sciences, Shaanxi Normal University, Xi’an, Shaanxi, People’s Republic of China; View further author information
,
Wei WeiCollege of Life Sciences, Shaanxi Normal University, Xi’an, Shaanxi, People’s Republic of China; View further author information
,
Li LiuCollege of Life Sciences, Shaanxi Normal University, Xi’an, Shaanxi, People’s Republic of China; View further author information
,
Gang LiuCollege of Life Sciences, Shaanxi Normal University, Xi’an, Shaanxi, People’s Republic of China; View further author information
,
Qi-Qiang GuoInstitute for Forest Resources and Environment of Guizhou, Guizhou University, Guizhou, Guiyang, People’s Republic of ChinaView further author information
&
Zeng-Qiang QianCollege of Life Sciences, Shaanxi Normal University, Xi’an, Shaanxi, People’s Republic of China; Correspondence[email protected]
View further author information
Pages 813-814 | Received 22 Dec 2018, Accepted 15 Jan 2019, Published online: 09 Feb 2019

References

  • Anisimova M, Gascuel O. 2006. Approximate likelihood-ratio test for branches: a fast, accurate, and powerful alternative. Syst Biol. 55:539–552.
  • Bolger AM, Lohse M, Usadel B. 2014. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics. 30:2114–2120.
  • Chen C, Zheng Y, Liu S, Zhong Y, Wu Y, Li J, Xu L-A, Xu M. 2017. The complete chloroplast genome of Cinnamomum camphora and its comparison with related Lauraceae species. PeerJ. 5:e3820.
  • Guindon S, Gascuel O. 2003. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol. 52:696–704.
  • Hahn C, Bachmann L, Chevreux B. 2013. Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads-a baiting and iterative mapping approach. Nucleic Acids Res. 41:e129.
  • Huang J-F, Li L, van der Werff H, Li H-W, Rohwer JG, Crayn DM, Meng H-H, van der Merwe M, Conran JG, Li J. 2016. Origins and evolution of cinnamon and camphor: a phylogenetic and historical biogeographical analysis of the Cinnamomum group (Lauraceae). Mol Phylogenet Evol. 96:33–44.
  • Li X, Li J, van der Werff H. 2008. Cinnamomum Schaeffer. Flora of China. 7:166–187.
  • Liu C, Shi L, Zhu Y, Chen H, Zhang J, Lin X, Guan X. 2012. CpGAVAS, an integrated web server for the annotation, visualization, analysis, and GenBank submission of completely sequenced chloroplast genome sequences. BMC Genomics. 13:715.
  • Milne I, Lindner D, Bayer M, Husmeier D, McGuire G, Marshall DF, Wright F. 2009. TOPALi v2: a rich graphical interface for evolutionary analyses of multiple alignments on HPC clusters and multi-core desktops. Bioinformatics. 25:126–127.
  • Wu C-C, Chu F-H, Ho C-K, Sung C-H, Chang S-H. 2017. Comparative analysis of the complete chloroplast genomic sequence and chemical components of Cinnamomum micranthum and Cinnamomum kanehirae. Holzforschung. 71:189–197.
  • Wu C-C, Ho C-K, Chang S-H. 2016. The complete chloroplast genome of Cinnamomum kanehirae Hayata (Lauraceae). Mitochondr DNA. 27:2681–2682.
  • Wu C-S, Wang T-J, Wu C-W, Wang Y-N, Chaw S-M. 2017. Plastome evolution in the sole hemiparasitic genus laurel dodder (Cassytha) and insights into the plastid phylogenomics of Lauraceae. Genome Biol Evol. 9:2604–2614.

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