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Mitogenome Announcement

Next-generation sequencing yields a nearly complete mitochondrial genome of the Forsyth’s toad-headed agama, Phrynocephalus forsythii (Reptilia, Squamata, Agamidae)

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Pages 817-819 | Received 25 Dec 2018, Accepted 15 Jan 2019, Published online: 09 Feb 2019

References

  • Bernt M, Donath A, Jühling F, Externbrink F, Florentz C, Fritzsch G, Pütz J, Middendorf M, Stadler PF. 2013. MITOS: improved de novo metazoan mitochondrial genome annotation. Mol Phylogenet Evol. 69:313–319.
  • Chen D, Zhou T, Guo X. 2016. The complete mitochondrial genome of Phrynocephalus forsythii (Reptilia, Squamata, Agamidae), a toad-headed agama endemic to the Taklamakan Desert. Mitochondrial DNA A. 27:4046–4048.
  • Gissi C, Iannelli F, Pesole G. 2008. Evolution of the mitochondrial genome of Metazoa as exemplified by comparison of congeneric species. Heredity. 101:301–320.
  • Guo X, Wang Y. 2007. Partitioned Bayesian analyses, dispersal-vicariance analysis, and the biogeography of Chinese toad-headed lizards (Agamidae: Phrynocephalus): a re-evaluation. Mol Phylogenet Evol. 45:643–462.
  • Hahn C, Bachmann L, Chevreux B. 2013. Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads-a baiting and iterative mapping approach. Nucleic Acids Res. 41:e129.
  • Jin Y, Brown RP. 2013. Species history and divergence times of viviparous and oviparous Chinese toad-headed sand lizards (Phrynocephalus) on the Qinghai-Tibetan Plateau. Mol Phylogenet Evol. 68:259–268.
  • Jin Y, Brown RP. 2018. Partition number, rate priors and unreliable divergence times in Bayesian phylogenetic dating. Cladistics. 34:568–573.
  • Kumazawa Y, Endo H. 2004. Mitochondrial genome of the Komodo dragon: efficient sequencing method with reptile-oriented primers and novel gene rearrangements. DNA Res. 11:115–125.
  • Liao P, Jin Y. 2016. The complete mitochondrial genome of the toadheaded lizard subspecies, Phrynocephalus theobaldi orientalis (Reptilia, Squamata, Agamidae). Mitochondrial DNA A. 27:559–560.
  • Macey JR, Schulte JA, Ananjeva NB, Dyke ET, Wang Y, Orlov N, Shafiei S, Robinson MD, Dujsebayeva T, Freund GS, et al. 2018. A molecular phylogenetic hypothesis for the Asian agamid lizard genus Phrynocephalus reveals discrete biogeographic clades implicated by plate tectonics. Zootaxa. 4467:1–81.
  • Ronquist F, Huelsenbeck JP. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics. 19:1572–1574.
  • Smith DR. 2016. The past, present and future of mitochondrial genomics: have we sequenced enough mtDNAs? Brief Funct Genomics. 15:47–54.
  • Solovyeva EN, Lebedev VS, Dunayev EA, Nazarov RA, Bannikova AA, Che J, Murphy RW, Poyarkov NA. 2018. Cenozoic aridization in Central Eurasia shaped diversification of toad-headed agamas (Phrynocephalus; Agamidae, Reptilia). Peer J. 6:e4543.
  • Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. 2013. MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol. 30:2725–2729.