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Mitochondrial DNA Part B
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Volume 4, 2019 - Issue 1
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Mito Communication

Complete mitochondrial genome of Stichaeus grigorjewi Herzenstein, 1890 (Zoarcales: Stichaeidae)

Sergei V. TuranovLaboratory of Molecular Systematic, A.V. Zhirmunsky Institute of Marine Biology, National Scientific Center of Marine Biology, Far Eastern BranchRussian Academy of Sciences, Vladivostok, Russia; ;Chair of Water Biological Resources and Aquaculture Far Eastern State Technical Fisheries University, Vladivostok, Russia; Correspondence[email protected]
ORCID Iconhttp://orcid.org/0000-0003-4829-9729View further author information
ORCID Icon,
Olesia A. RutenkoChair of Biodiversity and Marine Bioresources, Far Eastern Federal University, Vladivostok, RussiaView further author information
&
Yuri Ph. KartavtsevLaboratory of Molecular Systematic, A.V. Zhirmunsky Institute of Marine Biology, National Scientific Center of Marine Biology, Far Eastern BranchRussian Academy of Sciences, Vladivostok, Russia; ;Chair of Biodiversity and Marine Bioresources, Far Eastern Federal University, Vladivostok, RussiaView further author information
Pages 899-901 | Received 02 Dec 2018, Accepted 22 Dec 2018, Published online: 13 Feb 2019

References

  • Balakirev ES, Kravchenko AY, Romanov NS, Ayala FJ. 2018. Complete mitochondrial genome of the Arctic rainbow smelt Osmerus dentex (Osmeriformes, Osmeridae). Mitochondrial DNA B. 3:881–882.
  • Balakirev ES, Romanov NS, Ayala FJ. 2018. Complete mitochondrial genome of the surf smelt Hypomesus japonicus (Osmeriformes, Osmeridae). Mitochondrial DNA B. 3:1071–1072.
  • Bernt M, Donath A, Jühling F, Externbrink F, Florentz C, Fritzsch G, Pütz J, Middendorf M, Stadler PF. 2013. MITOS: improved de novo metazoan mitochondrial genome annotation. Mol Phylogenet Evol. 69:313–319.
  • Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32:1792–1797.
  • Fricke R, Eschmeyer WN, van der Laan R. 2018. Catalog of fishes: genera, species, references. Institute for Biodiversity Science and Sustainability, California Academy of Sciences. [accessed 2018 Nov 1].
  • Ayala L, Becerra J, Boo GH, Calderon D, DiMarco A, Garcia A, Gonzales R, Hughey JR, Jimenez GA. 2017. The complete mitochondrial genome of Xiphister atropurpureus (Perciformes: Stichaeidae). Mitochondrial DNA B. 2:161–162.
  • Iwasaki W, Fukunaga T, Isagozawa R, Yamada K, Maeda Y, Satoh TP, Sado T, Mabuchi K, Takeshima H, Miya M, Nishida M. 2013. MitoFish and MitoAnnotator: a mitochondrial genome database of fish with an accurate and automatic annotation pipeline. Mol Biol Evol. 30:2531–2540.
  • Johnstone KA, Marshall HD, Carr SM. 2007. Biodiversity genomics for species at risk: patterns of DNA sequence variation within and among complete mitochondrial genomes of three species of wolffish (Anarhichas spp.). Can J Zool. 85:151–158.
  • Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, et al. 2012. Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics. 28:1647–1649.
  • Lait LA, Carr SM. 2018. Intraspecific mitogenomics of three marine species-at-risk: Atlantic, spotted, and northern wolffish (Anarhichas spp.). Genome [Internet]. 61:625–634. Available from: https://doi.org/10.1139/gen-2018-0043
  • Miya M, Takeshima H, Endo H, Ishiguro NB, Inoue JG, Mukai T, Satoh TP, Yamaguchi M, Kawaguchi A, Mabuchi K, et al. 2003. Major patterns of higher teleostean phylogenies: a new perspective based on 100 complete mitochondrial DNA sequences. Mol Phylogenet Evol. 26:121–138.
  • Near TJ, Eytan RI, Dornburg A, Kuhn KL, Moore JA, Davis MP, Wainwright PC, Friedman M, Smith WL. 2012. Resolution of ray-finned fish phylogeny and timing of diversification. Proc Natl Acad Sci USA. 109:13698–13703.
  • Nelson JS, Grande TC, Wilson MVH. 2016. Fishes of the world. [Place unknown]: John Wiley & Sons.
  • Paradis E, Claude J, Strimmer K. 2004. APE: analyses of phylogenetics and evolution in R language. Bioinformatics. 20:289–290.
  • Parin NV, Evseenko SA, Vasil’eva ED. 2014. Fishes of the Russian Seas: annotated catalogue. Moscow: KMK Scientific Press.
  • Radchenko OA. 2015. The system of the suborder Zoarcoidei (Pisces, Perciformes) as inferred from molecular genetic data. Russ J Genet. 51:1096–1112.
  • Radchenko OA. 2016. Timeline of the evolution of eelpouts from the suborder Zoarcoidei (Perciformes) based on DNA variability. J Ichthyol. 56:556–568.
  • Swanburg T, Horne JB, Baillie S, King SD, McBride MC, Mackley MP, Paterson IG, Bradbury IR, Bentzen P. 2016. Complete mitochondrial genomes for Icelus spatula, Aspidophoroides olrikii and Leptoclinus maculatus: pan-Arctic marine fishes from Canadian waters. Mitochondrial DNA A. 27:2982–2983.
  • Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. 2013. MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol. 30:2725–2729.
  • Turanov SV, Lee Y-H, Kartavtsev YP. 2018. Structure, evolution and phylogenetic informativeness of eelpouts (Cottoidei: Zoarcales) mitochondrial control region sequences. Mitochondrial DNA A [Internet]. 1–9. Available from: https://doi.org/10.1080/24701394.2018.1484117
  • Turanov SV, Kartavtsev YP, Lee YH, Jeong D. 2017. Molecular phylogenetic reconstruction and taxonomic investigation of eelpouts (Cottoidei: Zoarcales) based on Co-1 and Cyt-b mitochondrial genes. Mitochondrial DNA A DNA Mapping Seq Anal. 28:547–557.
  • Yang C-H, Chang H-W, Ho C-H, Chou Y-C, Chuang L-Y. 2011. Conserved PCR primer set designing for closely-related species to complete mitochondrial genome sequencing using a sliding window-based PSO algorithm. PLoS One. 6:e17729.
  • Yang H, Bao X, Wang B, Liu W. 2016. The complete mitochondrial genome of Chirolophis japonicus (Perciformes: Stichaeidae). Mitochondrial DNA A. 27:4419–4420.

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