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Mitochondrial DNA Part B
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Volume 4, 2019 - Issue 1
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Mitogenome Announcement

Characterization of the complete chloroplast genome of the endemic wild Chinese tree Castanea seguinii

Lili ChengKey Laboratory for Silviculture and Conservation of Education Ministry, Beijing Forestry University, Beijing, China; ;National Chestnut Engineering Technology Research Center, Beijing Academy of Forestry and Pomology Sciences, Beijing, ChinaView further author information
,
Guanglong HuNational Chestnut Engineering Technology Research Center, Beijing Academy of Forestry and Pomology Sciences, Beijing, ChinaORCID Iconhttp://orcid.org/0000-0001-6060-1826View further author information
ORCID Icon,
Wugang HuangNational Chestnut Engineering Technology Research Center, Beijing Academy of Forestry and Pomology Sciences, Beijing, ChinaView further author information
,
Qingchang CaoNational Chestnut Engineering Technology Research Center, Beijing Academy of Forestry and Pomology Sciences, Beijing, ChinaView further author information
,
Yanping LanNational Chestnut Engineering Technology Research Center, Beijing Academy of Forestry and Pomology Sciences, Beijing, ChinaCorrespondence[email protected]
View further author information
&
Shuchai SuKey Laboratory for Silviculture and Conservation of Education Ministry, Beijing Forestry University, Beijing, China; Correspondence[email protected]
View further author information
Pages 1165-1166 | Received 20 Oct 2018, Accepted 10 Feb 2019, Published online: 21 Mar 2019

References

  • Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. 1990. Basic local alignment search tool. J Mol Biol. 215:403–410.
  • Bankevich A, Nurk S, Antipov D, Gurevich AA, Dvorkin M, Kulikov AS, Lesin VM, Nikolenko SI, Pham S, Prjibelski AD, et al. 2012. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J Comput Biol. 19:455–477.
  • Cheng L, Feng H, Rao Q, Wu W, Zhou M, Hu G, Huang W. 2012. Diversity of wild chestnut chloroplast DNA SSRs in Shiyan. J Fruit Sci Chinese. 29:382–386.
  • Lang P, Dane F, Kubisiak TL. 2006. Phylogeny of Castanea (Fagaceae) based on chloroplast trnT-L-F sequence data. Tree Genet Genom. 2:132–139.
  • Li J, Wang S, Jing Y, Wang L, Zhou S. 2013. A modified CTAB protocol for plant DNA extraction. Chinese Bull Bot. 48:72–78. Chinese.
  • Luo R, Liu B, Xie Y, Li Z, Huang W, Yuan J, He G, Chen Y, Pan Q, Liu Y, et al. 2012. SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler. GigaScience. 1:18.
  • Rutter P, Miller G, Payne J. 1990. Chestnuts In: Moore JN, Ballington JR, editors. Genetic resources of temperate fruit and nut crops. Wageningen (The Netherlands): The International Society for Horticultural Science; p. 761–788.
  • Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. 2013. MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0. Mol Biol Evol. 30:2725–2729.
  • Wyman SK, Jansen RK, Boore JL. 2004. Automatic annotation of organellar genomes with DOGMA. Bioinformatics. 20:3252–3255.
  • Yousefzadeh H, Hosseinzadeh Colagar A, Akbarzadeh F, Tippery NP. 2014. Taxonomic status and genetic differentiation of Hyrcanian Castanea based on noncoding chloroplast DNA sequences data. Tree Genetics & Genomes. 10:1611–1629.

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