1,063
Views
1
CrossRef citations to date
0
Altmetric
Mito Communication

DNA barcoding reveals distinct population of Plotosus canius (Siluriformes: Plotosidae) in Sundarbans waters

, , , , , & show all
Pages 1167-1171 | Received 29 Oct 2018, Accepted 02 Mar 2019, Published online: 21 Mar 2019

References

  • Abdullah A, Rehbein H. 2016. DNA barcoding for the species identification of commercially important fishery products in Indonesian markets. Int J Food Sci Technol. 52:266–274.
  • Bandelt HJ, Forster P, Röhl A. 1999. Median-joining networks for inferring intraspecific phylogenies. Mol Biol Evol. 16:37–48.
  • Bariche M, Torres M, Smith C, Sayar N, Azzurro E, Baker R, Bernardi G. 2015. Red sea fishes in the Mediterranean Sea: a preliminary investigation of a biological invasion using DNA barcoding. J Biogeogr. 42:2363–2373.
  • Charlesworth D, Willis JH. 2009. The genetics of inbreeding depression. Nat Rev Genet. 10:783–796.
  • Costello AB, Down TE, Pollard SM, Pacas CJ, Taylor EB. 2003. The influence of history and contemporary stream hydrology on the evolution of genetic diversity within species: an examination of microsatellite DNA variation in bull trout, Salvelinus confluentus (Pisces: Salmonidae). Evolution. 57:328–344.
  • Duvernell DD, Lindmeier JB, Faust KE, Whitehead A. 2008. Relative influences of historical and contemporary forces shaping the distribution of genetic variation in the Atlantic killifish, Fundulus heteroclitus. Mol Ecol. 17:1344–1360.
  • Eschmeyer WN. 2012. Catalog of fishes. California Academy of Sciences. [Accessed 2019 Feb 11] http://research.calacademy.org/research/ichthyology/catalog/fishcatmain.asp.
  • Froese R, Pauly D., editors. 2018. Fishbase. World Wide Web electronic publication. www.fishbase.org. Accessed October 15, 2018.
  • Gomon JR, Taylor WR. 1982. Plotosus nkunga, a new species of catfish from South Africa, with a redescription of Plotosus limbatus Valenciennes and a key to the species of Plotosus (Siluriformes: Plotosidae). Vol. 22. J. L. B. Smith Institute of Ichthyology Special Publication; Grahamstown: Rhodes University, p. 1–16.
  • Hebert PD, Cywinska A, Ball SL, deWaard JR. 2003. Biological identifications through DNA barcodes. Philosophical transactions of the Royal Society of London. Series B, Biol Sci. 270:313–322.
  • Khalili Samani N, Esa Y, Nurul Amin SM, Mohd Ikhsan NF. 2016. Phylogenetics and population genetics of Plotosus canius (Siluriformes: Plotosidae) from Malaysian coastal waters. PeerJ. 4:e1930.
  • Khan MSA, Alam MJ, Rheman S, Mondal S, Rahman MM. 2002. Study on the Fecundity and GIS of brackish catfish Plotosus canius. Online J Biol Sci. 2:232–234.
  • Kumar B. 2012. Finding of (Plotosidae: Siluriforms) and its abundance from Parangipettai Coastal Area–a review. Int J Recent Sci Res. 3:482–485.
  • Kundu S, Kumar V, Laskar BA, Tyagi K, Chandra K. 2018. Investigating genetic divergence in subspecies of Manouria emys: distinct lineages or plastron anomalies? Mitochondrial DNA B. 3:166–170.
  • Kundu S, Kumar V, Tyagi K, Chandra K. 2018. Environmental DNA (eDNA) testing for detection of freshwater turtles in a temple pond. Herpetol Notes. 11:1–3.
  • Laskar BA, Kumar V, Kundu S, Darshan A, Tyagi K, Chandra K. 2018. DNA barcoding of fishes from River Diphlu within Kaziranga National park in Northeast India. Mitochondrial DNA A DNA Mapp Seq Anal. 30:126–134. doi:10.1080/24701394.2018.1463373.
  • Laskar BA, Kumar V, Kundu S, Tyagi K, Chandra K. 2018. Taxonomic quest: validating two mahseer fishes (Actinopteri: Cyprinidae) through molecular and morphological data from biodiversity hotspots in India. Hydrobiologia. 815:113–124.
  • Leh MUC, Sasekumar A, Chew LL. 2012. Feeding biology of Eel Catfish Plotosus Canius Hamilton in a Malaysian Mangrove Estuary and Mudflat. Raffles Bull Zool. 60:551–557.
  • Leray M, Knowlton N. 2015. DNA barcoding and metabarcoding of standardized samples reveal patterns of marine benthic diversity. Proc Natl Acad Sci USA. 112:2076–2081.
  • Librado P, Rozas J. 2009. DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics. 25:1451–1452.
  • Ng HH, Sparks JS. 2002. Plotosus fisadoha, a new species of marine catfish (Teleostei: Siluriformes: Plotosidae) from Madagascar. Proc Biol Soc Washington. 115: 564–569.
  • Pauly D, Christensen V, Guénette S, Pitcher TJ, Sumaila UR, Walters CJ, Watson R, Zeller D. 2002. Towards sustainability in world fisheries. Nature. 418:689–695.
  • Prithiviraj N, Annadurai D. 2012. Studies on bioactive properties of the Catfish Plotosus canius (Hamilton, 1822). Int J Recent Sci Res. 3:467–473.
  • Prithiviraj N. 2014. Studies on biological properties and in silico approach of Plotosus canius, from Parangipettai coastal waters. Int J Modern Res Rev. 1:24–37.
  • Singh SK, Mishra S, Aspi J, Kvist L, Nigam P, Pandey P, Sharma R, Goyal SP. 2015. Tigers of Sundarbans in India: is the population a separate conservation unit? PLoS One. 10:e0118846.
  • Tallmon DA, Luikart G, Waples RS. 2004. The alluring simplicity and complex reality of genetic rescue. Trends Ecol Evol. 19:489–496.
  • Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. 2013. MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol. 30:2725–2729.
  • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. 1997. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25:4876–4882.
  • Thomsen PF, Kielgast J, Iversen LL, Møller PR, Rasmussen M, Willerslev E. 2012. Detection of a diverse marine fish fauna using environmental DNA from seawater samples. PLoS One. 7:e41732.
  • Tyagi K, Kumar V, Singha D, Chandra K, Laskar BA, Kundu S, et al. 2017. DNA barcoding studies on Thrips in India: cryptic species, species complexes. Sci Rep. 7:1–14.
  • Usman BI, Amin SMN, Arshad A, Rahman MA. 2013. Review of some biological aspects and fisheries of Grey-Eel Catfish Plotosus canius (Hamilton, 1822). Asian J Anim Vet Adv. 2:154–167.
  • Ward RD, Zemlak TS, Innes BH, Last PR, Hebert P. 2005. DNA barcoding of Australia’s fish species. Philos Trans Royal Soc B. 360:1847–1857.
  • Yoshino T, Kishimoto H. 2008. Plotosus japonicus, a new eeltail catfish (Siluriformes: Plotosidae) from Japan. Bull Natl Mus Nat Sci. S2:1–11.