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Mitogenome Announcement

Characterization the complete chloroplast genome of the tomato (Solanum lycopersicum L.) from China

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Pages 1374-1376 | Received 16 Feb 2019, Accepted 13 Mar 2019, Published online: 02 Apr 2019

References

  • Bankevich A, Nurk S, Antipov D, Gurevich AA, Dvorkin M, Kulikov AS, Lesin VM, Nikolenko SI, Pham S, Prjibelski AD, et al. 2012. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J Comput Biol. 19:455–477.
  • Bi G, Mao Y, Xing Q, Cao M. 2018. HomBlocks: a multiple-alignment construction pipeline for organelle phylogenomics based on locally collinear block searching. Genomics. 110:18–22.
  • Consortium TTG. 2012. The tomato genome sequence provides insights into fleshy fruit evolution. Nature. 485:635.
  • Dorais M, Ehret DL, Papadopoulos AP. 2008. Tomato (Solanum lycopersicum) health components: from the seed to the consumer. Phytochem Rev. 7:231–250.
  • Kumar S, Stecher G, Li M, Knyaz C, Tamura K. 2018. MEGA X: molecular evolutionary genetics analysis across computing platforms. Mol Biol Evol. 35:1547–1549.
  • Lowe TM, Chan PP. 2016. tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes. Nucleic Acids Res. 44:54–57.
  • Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 30:1312–1313.
  • Wyman SK, Jansen RK, Boore JL. 2004. Automatic annotation of organellar genomes with DOGMA. Bioinformatics. 20:3252–3255.