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Mitogenome Announcement

Characterization of the complete chloroplast genome of the Chinese sorghum, Sorghum bicolor from China

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Pages 1421-1423 | Received 29 Jan 2019, Accepted 13 Mar 2019, Published online: 05 Apr 2019

References

  • Bankevich A, Nurk S, Antipov D, Gurevich AA, Dvorkin M, Kulikov AS, Lesin VM, Nikolenko SI, Pham S, Prjibelski AD, et al. 2012. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J Comput Biol. 19:455–477.
  • Bi G, Mao Y, Xing Q, Cao M. 2018. HomBlocks: a multiple-alignment construction pipeline for organelle phylogenomics based on locally collinear block searching. Genomics. 110 18–22.
  • Morris GP, Ramu P, Deshpande SP, Hash CT, Shah T, Upadhyaya HD, Riera-Lizarazu O, Acharya CB, Mitchell SE, Harriman J, et al. 2013. Population genomic and genome-wide association studies of agroclimatic traits in sorghum. Proc Natl Acad Sci. 110:453–458.
  • Kumar S, Stecher G, Li M, Knyaz C, Tamura K. 2018. MEGA X: molecular evolutionary genetics analysis across computing platforms. Mol Biol Evol. 35:1547–1549.
  • Lowe TM, Chan PP. 2016. tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes. Nucleic Acids Res. 44:54–57.
  • Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 30:1312–1313.
  • Too EJ, Onkware AO, Were BA, Gudu S, Carlsson A, Geleta M. 2018. Molecular markers associated with aluminium tolerance in sorghum bicolor. Hereditas. 155:20.
  • Vermerris W. 2011. Survey of genomics approaches to improve bioenergy traits in maize, sorghum and sugarcane. J Integr Plant Biol. 53:105–119.
  • Wyman SK, Jansen RK, Boore JL. 2004. Automatic annotation of organellar genomes with DOGMA. Bioinformatics. 20:3252–3255.