Advanced search
Publication Cover
Mitochondrial DNA Part B
Resources
Volume 4, 2019 - Issue 1
Submit an article Journal homepage
663
Views
8
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

Characterization of the complete chloroplast genome of Sparganium stoloniferum (Poales: Typhaceae) and phylogenetic analysis

Ting SuCollege of Life Sciences, Guizhou University, Guiyang, Guizhou550025, China; View further author information
,
Jia-Xin YangCollege of Life Sciences, Guizhou University, Guiyang, Guizhou550025, China; View further author information
,
Yao-Guang LinCollege of Life Sciences, Guizhou University, Guiyang, Guizhou550025, China; View further author information
,
Nian KangCollege of Life Sciences, Guizhou University, Guiyang, Guizhou550025, China; View further author information
&
Guo-Xiong HuCollege of Life Sciences, Guizhou University, Guiyang, Guizhou550025, China; ;Research Center for Biodiversity and Nature Conservation, Guizhou University, Guiyang, Guizhou550025, ChinaCorrespondence[email protected]
View further author information
Pages 1402-1403 | Received 05 Feb 2019, Accepted 13 Mar 2019, Published online: 05 Apr 2019

References

  • Chen YD. 1992. Sparganiaceae. In: Sun XZ, editor. Flora Reipublicae Popularis Sinicae. Vol. 8. Beijing: Science Press; p. 25–26.
  • Cook CDK, Nicholls MS. 1986. A monographic study of the genus Sparganium (Sparganiaceae). Bot Helv. 96:213–267.
  • Doyle JJ, Doyle JL. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull. 19:11–15.
  • Givnish TJ, Barfuss MH, Van Ee B, Riina R, Schulte K, Horres R, Gonsiska PA, Jabaily RS, Crayn DM, Smith JAC, et al. 2011. Phylogeny, adaptive radiation, and historical biogeography in Bromeliaceae: insights from an eight-locus plastid phylogeny. Am J Bot. 98:872–895.
  • Givnish TJ, Zuluaga A, Spalink D, Soto Gomez M, Lam VKY, Saarela JM, Sass C, Iles WJD, de Sousa DJL, Leebens-Mack J, et al. 2018. Monocot plastid phylogenomics, timeline, net rates of species diversification, the power of multi-gene analyses, and a functional model for the origin of monocots. Am J Bot. 105:1888–1910.
  • Jin JJ, Yu WB, Yang JB, Song Y, Yi TS, Li DZ. 2018. GetOrganelle: a simple and fast pipeline for de novo assemble of a complete circular chloroplast genome using genome skimming data. BioRxiv.
  • Kubitzki K. 1998. Typhaceae. In: Kubitzki K, editor. Flowering plants. Monocotyledons: Alismatanae and Commelinanae (except Gramineae). Vol. 4. Heidelberg: Springer-Verlag; p. 457–461.
  • Lohse M, Drechsel O, Kahlau S, Bock R. 2013. OrganellarGenomeDRAW—a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets. Nucleic Acids Res. 41:W575–W581.
  • Miller MA, Pfeiffer W, Schwartz T. 2010. Creating the CIPRES science gate-way for inference of large phylogenetic trees. New Orleans, LA: Proceedings of the gateway computing environments workshop (GCE).
  • Müller-Doblies D. 1970. Über die Verwandtschaft von Typha und Sparganium im Infloreszenz- und Blütenbau. Bot Jahrb. 89:451–562.
  • Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 30:1312–1313.
  • Sulman JD, Drew BT, Drummond C, Hayasaka E, Sytsma KJ. 2013. Systematics, biogeography, and character evolution of Sparganium (Typhaceae): diversification of a widespread, aquatic lineage. Am J Bot. 100:2023–2039.
  • Tang YM, He C, Yang YJ, Duan JA, Wu QN, Liang QL. 2018. Research progress on ‘SanLeng’ from tubers of Scirpus yagara and Sparganium stoloniferum of different families. Modern Chinese Med. 20:110–116.
  • Wyman SK, Jansen RK, Boore JL. 2004. Automatic annotation of organellar genomes with DOGMA. Bioinformatics. 20:3252–3255.

Related research

People also read lists articles that other readers of this article have read.

Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.

Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.