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Mitogenome Announcement

Characterization of the complete chloroplast genome of Amorphophallus konjac (Araceae) and its phylogenetic analysis

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Pages 1658-1659 | Received 13 Mar 2019, Accepted 06 Apr 2019, Published online: 25 Apr 2019

References

  • Chua M, Baldwin TC, Hocking TJ, Chan K. 2010. Traditional uses and potential health benefits of Amorphophallus konjac K. Koch ex N.E.Br. J Ethnopharmacol. 128:268–278.
  • Doyle JJ, Doyle JL. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull. 19:11–15.
  • Huang DI, Cronk QC. 2015. Plann: a command-line application for annotating plastome sequences. Appl Plant Sci. 3:1500023–1500026.
  • Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30:772–780.
  • Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, et al. 2012. Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics. 28:1647–1649.
  • Kumar S, Stecher G, Li M, Knyaz C, Tamura K. 2018. MEGA X: molecular evolutionary genetics analysis across computing platforms. Mol Biol Evol. 35:1547–1549.
  • Li H, Durbin R. 2009. Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics. 25:1754–1760.
  • Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R, 1000 Genome Project Data Processing Subgroup. 2009. The sequence alignment/map format and samtools. Bioinformatics. 25:2078–2079.
  • Li H, Long CL. 1998. Taxonomy of Amorphophallus in China. Acta Bot Yunnanica. 20:167–170.
  • Li H, Zhu GH, Peter CB, Jin M, Wibert LH, Josef B, Niels J. 2010. Flora of China. Vol. 23. Beijing: Science Press; St. Louis: Missouri Botanical Garden Press.
  • Saitou N, Nei M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol. 4:406–425.
  • Zerbino DR, Birney E. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18:821–829.