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Mitochondrial DNA Part B
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Volume 4, 2019 - Issue 1
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Mitogenome Announcement

The complete chloroplast genome of Pyrrosia calvata (Polypodiaceae), a traditional Chinese medicinal fern only restricted to Guangxi, China

Yihui MinSchool of Life Sciences, Sun Yat-sen University, Guangzhou, China; View further author information
,
Shicheng CaiSchool of Life Sciences, Sun Yat-sen University, Guangzhou, China; View further author information
,
Haoyun XiaoSchool of Life Sciences, Sun Yat-sen University, Guangzhou, China; View further author information
,
Minghui ZhangSchool of Life Sciences, Sun Yat-sen University, Guangzhou, China; View further author information
,
Yongfeng HongSchool of Life Sciences, Sun Yat-sen University, Guangzhou, China; View further author information
,
Ziqing HeSchool of Life Sciences, Sun Yat-sen University, Guangzhou, China; View further author information
,
Zhen WangSchool of Life Sciences, Sun Yat-sen University, Guangzhou, China; View further author information
,
Ting WangCollege of Life Sciences, South China Agricultural University, Guangzhou, China; Correspondence[email protected]
View further author information
&
Yingjuan SuSchool of Life Sciences, Sun Yat-sen University, Guangzhou, China; ;Research Institute of Sun Yat-sen University in Shenzhen, Shenzhen, ChinaCorrespondence[email protected]
View further author information
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Pages 1757-1758 | Received 28 Mar 2019, Accepted 13 Apr 2019, Published online: 06 May 2019

References

  • Bolger AM, Lohse M, Usadel B. 2014. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics. 30:2114–2120.
  • Editorial Office of National Chinese Herbal Medicine Collection. 1975. Quan Guo Zhong Cao Yao Hui Bian [Collection of National Chinese Herbal Medicine]. Beijing: People’s Medical Publishing House. (Chinese).
  • Hovenkamp PH. 1986. A monograph of the fern genus Pyrrosia: Polypodiaceae. Vol. 9. Brill Archive; p. 1–280.
  • Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30:772–780.
  • Ravensberg W, Hennipman E. 1986. The Pyrrosia species formerly referred to Drymoglossum and Saxiglossum (Filicales, Polypodiaceae.). Leiden Botanical Series. 9:281–310.
  • Schattner P, Brooks AN, Lowe TM. 2005. The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs. Nucleic Acids Res. 33:W686–W689.
  • Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 30:1312–1313.
  • The Guangxi Zhuang Autonomous Region Health Department. 1990. Guangxi Zhong Yao Cai Biao Zhun [Guangxi Chinese medicine standard]. Nanning: Guangxi Science and Technology Publishing House; p. 184–185. (Chinese).
  • Vasques DT, Ebihara A, Ito M. 2017. The felt fern genus Pyrrosia Mirbel (Polypodiaceae): a new subgeneric classification with a molecular phylogenic analysis based on three plastid markers. Acta Phytotax Geobot. 68:65–82.
  • Wei XP, Qi YD, Zhang XC, Luo L, Shang H, Wei R, Liu HT, Zhang BG. 2017. Phylogeny, historical biogeography and characters evolution of the drought resistant fern Pyrrosia Mirbel (Polypodiaceae) inferred from plastid and nuclear markers. Sci Rep. 7:12757.
  • Wyman SK, Jansen RK, Boore JL. 2004. Automatic annotation of organellar genomes with DOGMA. Bioinformatics. 20:3252–3255.
  • Zerbino DR, Birney E. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18:821–829.
  • Zhang XC, Lu SG, Lin YX, Qi XP, Moore S, Xing FW, Wang FG, Hovenkamp PH, Gilbert MG, Nooteboom HP, et al. 2013. Polypodiaceae. In: Wu ZY, Raven PH, Hong DY, eds., Flora of China. Vol. 2–3 (Pteridophytes). Beijing: Science Press; p. 758–850.

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