911
Views
8
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

The complete chloroplast genome of the traditional medicinal plant Stellera chamaejasme L. (Thymelaeaceae)

, ORCID Icon & ORCID Icon
Pages 1796-1797 | Received 07 Apr 2019, Accepted 20 Apr 2019, Published online: 07 May 2019

References

  • Asada Y, Sukemori A, Watanabe T, Malla KJ, Yoshikawa T, Li W, Koike K, Chen C-H, Akiyama T, Qian K, et al. 2011. Stelleralides A-C, novel potent anti-HIV daphnane-type diterpenoids from Stellera chamaejasme L. Org Lett. 13:2904–2907.
  • Cho W-B, Han E-K, Choi G, Lee J-H. 2018. The complete chloroplast genome of Daphne kiusiana, an evergreen broad-leaved shrub on Jeju Island. Conserv Genet Res. 10:103–106.
  • Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30:772–780.
  • Kim M, Lee HJ, Randy A, Yun JH, Oh S-R, Nho CW. 2017. Stellera chamaejasme and its constituents induce cutaneous wound healing and anti-inflammatory activities. Sci Rep. 7:42490.
  • Kumar S, Stecher G, Li M, Knyaz C, Tamura K. 2018. MEGA X: Molecular Evolutionary Genetics Analysis across computing platforms. Mol Biol Evol. 35:1547–1549.
  • Lee JJ, Oh S-H. 2017. A comparative morphological study of Thymelaeaceae in Korea. Korean J Pl Taxon. 47:207–221.
  • Li H. 2013. Aligning sequence reads, clone sequences and assembly contigs with BWA-MEM. arXiv Preprint arXiv. 1303.3997.
  • Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R. 2009. The sequence alignment/map format and SAMtools. Bioinformatics. 25:2078–2079.
  • Wang Y, Gilbert MG. 2007. Stellera Linnaeus. Flora of China, Vol. 13. Beijing, China: Science Press.
  • Zerbino DR, Birney E. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Research. 18:821–829.
  • Zhang Y-H, Zhang S-D, Ling L-Z. 2015. De novo transcriptome analysis to identify flavonoid biosynthesis genes in Stellera chamaejasme. Plant Gene. 4:64–68.
  • Zhao M, Gao X, Wang J, He X, Han B. 2013. A review of the most economically important poisonous plants to the livestock industry on temperate grasslands of China. J Appl Toxicol. 33:9–17.
  • Zhao Q-Y, Wang Y, Kong Y-M, Luo D, Li X, Hao P. 2011. Optimizing de novo transcriptome assembly from short-read RNA-Seq data: a comparative study. BMC Bioinformatics. 12:S2.
  • Zhu A, Guo W, Gupta S, Fan W, Mower JP. 2016. Evolutionary dynamics of the plastid inverted repeat: the effects of expansion, contraction, and loss on substitution rates. New Phytol. 209:1747–1756.