624
Views
1
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

The complete mitogenome of the Eurasian blindsnake Xerotyphlops vermicularis (Reptilia, Typhlopidae)

Pages 1990-1991 | Received 22 Apr 2019, Accepted 03 May 2019, Published online: 21 May 2019

References

  • Adalsteinsson SA, Branch WR, Trape S, Vitt LJ, Hedges SB. 2009. Molecular phylogeny, classification, and biogeography of snakes of the family Leptotyphlopidae (Reptilia, Squamata). Zootaxa. 2244:1–50.
  • Bernt M, Donath A, Jühling F, Externbrink F, Florentz C, Fritzsch G, Pütz J, Middendorf M, Stadler PF. 2013. MITOS: improved de novo metazoan mitochondrial genome annotation. Mol Phylogenet Evol. 69:313–319.
  • Dierckxsens N, Mardulyn P, Smits G. 2017. NOVOPlasty: de novo assembly of organelle genomes from whole genome data. Nucleic Acids Res. 45:e18.
  • Faircloth BC, McCormack JE, Crawford NG, Harvey MG, Brumfield RT, Glenn TC. 2012. Ultraconserved elements anchor thousands of genetic markers spanning multiple evolutionary timescales. Syst Biol. 61:717–726.
  • Hedges SB, Marion AB, Lipp KM, Marin J, Vidal N. 2014. A taxonomic framework for typhlopid snakes from the Caribbean and other regions (Reptilia, Squamata). Caribb Herpet. 49:1–61.
  • Katoh K, Rozewicki J, Yamada KD. 2017. MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization. Brief Bioinform. bbx108.
  • Kornilios P. 2017. Polytomies, signal and noise: revisiting the mitochondrial phylogeny and phylogeography of the Eurasian blindsnake species complex (Typhlopidae, Squamata). Zool Scr. 46:665–674.
  • Kornilios P, Giokas S, Lymberakis P, Sindaco R. 2013. Phylogenetic position, origin and biogeography of Palearctic and Socotran blind-snakes (Serpentes: Typhlopidae). Mol Phylogenet Evol. 68:35–41.
  • Kornilios P, Ilgaz Ç, Kumlutaş Y, Giokas S, Fraguedakis-Tsolis S, Chondropoulos B. 2011. The role of Anatolian refugia in herpetofaunal diversity: an mtDNA analysis of Typhlops vermicularis Merrem, 1820 (Squamata, Typhlopidae). Amphibia-Reptilia. 32:351–363.
  • Kornilios P, Ilgaz Ç, Kumlutaş Y, Lymberakis P, Moravec J, Sindaco R, Rastegar-Pouyani N, Afroosheh M, Giokas S, Fraguedakis-Tsolis S, et al. 2012. Neogene climatic oscillations shape the biogeography and evolutionary history of the Eurasian blindsnake. Mol Phylogenet Evol. 62:856–873.
  • Minh BQ, Nguyen MAT, von Haeseler A. 2013. Ultrafast approximation for phylogenetic bootstrap. Mol Biol Evol. 30:1188–1195.
  • Miralles A, Marin J, Markus D, Herrel A, Hedges SB, Vidal N. 2018. Molecular evidence for the paraphyly of Scolecophidia and its evolutionary implications. J Evol Biol. 31:1782–1793.
  • Nagy ZT, Marion AB, Glaw F, Miralles A, Nopper J, Vences M, Hedges SB. 2015. Molecular systematics and undescribed diversity of Madagascan scolecophidian snakes (Squamata: Serpentes). Zootaxa. 4040:31–47.
  • Nguyen L-T, Schmidt HA, von Haeseler A, Minh BQ. 2015. IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol Biol Evol. 32:268–274.
  • Pyron RA, Wallach V. 2014. Systematics of the blindsnakes (Serpentes: Scolecophidia: Typhlopoidea) based on molecular and morphological evidence. Zootaxa. 3829:1–81.
  • Qian L, Wang H, Yan J, Pan T, Jiang S, Rao D, Zhang B. 2018. Multiple independent structural dynamic events in the evolution of snake mitochondrial genomes. BMC Genomics. 1019:354.
  • Uetz P, Freed P, Hošek J. 2019. The Reptile Database; [accessed 2019 April 20]. http://www.reptile-database.org.
  • Vidal N, Marin J, Morini M, Donnellan S, Branch WR, Thomas R, Vences M, Wynn A, Cruaud C, Hedges SB. 2010. Blindsnake evolutionary tree reveals long history on Gondwana. Biol Lett. 6:558–561.