Advanced search
Publication Cover
Mitochondrial DNA Part B
Resources
Volume 5, 2020 - Issue 2
Submit an article Journal homepage
786
Views
6
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

The complete chloroplast genome sequence of Viola japonica (Violaceae)

Kyeong-Sik CheonDepartment of Biological Science, Sangji University, Wonju, South Korea; View further author information
,
Dong-Kap KimDivision of Forest Biodiversity and Herbarium, Korea National Arboretum, Pocheon, South Korea; View further author information
,
Kyung-Ah KimDepartment of Biological Sciences, Kangwon National University, Chuncheon, South Korea; ;Environmental Research Institute, Kangwon National University, Chuncheon, South KoreaView further author information
&
Ki-Oug YooDepartment of Biological Sciences, Kangwon National University, Chuncheon, South Korea; Correspondence[email protected]
View further author information
Pages 1297-1298 | Received 10 Feb 2020, Accepted 11 Feb 2020, Published online: 04 Mar 2020

References

  • Ballard HE, Sytsma KJ, Kowal RR. 1998. Shrinking the violets: phylogenetic relationships of infrageneric groups in Viola (Violaceae) based on internal transcribed spacer DNA sequences. Syst Bot. 23(4):439–458.
  • Cheon KS, Kim KA, Kwak M, Lee B, Yoo K. 2019. The complete chloroplast genome sequences of four Viola species (Violaceae) and comparative analysis with its congeneric species. PLoS One. 14(3):e0214162.
  • Clausen J. 1967. Cytotaxonomy and distributional ecology of western North American violets. Madroño. 17:173–204.
  • Greiner S, Lehwark P, Bock R. 2019. OrganellarGenomeDRAW (OGDRAW) version 1.3.1: expended toolkit for the graphical visualization of organellar genomes. Nucleic Acid Res. 47(W1):W59–W64.
  • Katoh K, Misawa K, Kuma K, Miyata T. 2002. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res. 30(14):3059–3066.
  • Liang GX, Xing FW. 2010. Infrageneric phylogeny of the genus Viola (Violaceae) based on trnL-trnF, psbA-trnH, rpl16, ITS sequences, cytological and morphological data. Acta Botanica Yunnanica. 32:477–488.
  • Marcussen T, Heier L, Brysting AK, Oxelman B, Jakobsen S. 2015. From gene trees to a dated allopolyploid network: insights from the Angiosperm genus Viola (Violaceae). Syst Biol. 64(1):84–101.
  • Schattner P, Brooks AN, Lowe TM. 2005. The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs. Nucleic Acids Res. 33:W686–W689.
  • Stamatakis A. 2006. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics. 22(21):2688–2690.
  • Wahlert GA, Marcussen T, De Paula-Souza J, Feng M, Ballard HE. 2014. A phylogeny of the Violaceae (Malpighiales) inferred from plastid DNA sequences: implications for generic diversity and intrafamilial classification. Syst Bot. 39(1):239–252.
  • Wyman SK, Jansen RK, Boore JL. 2004. Automatic annotation of organellar genomes with DOGMA. Bioinformatics. 20(17):3252–3255.
  • Yockteng R, Ballard HE, Mansion G, Dajoz I, Nadot S. 2003. Relationships among pansies (Viola section Melanium) investigated using ITS and ISSR markers. Plant Syst Evol. 241(3–4):153–170.
  • Yoo KO, Jang SK. 2010. Infrageneric relationships of Korean Viola based on eight chloroplast markers. J Syst Evol. 48(6):474–481.
  • Yoo KO, Jang SK, Lee WT. 2005. Phylogeny of Korean Viola based on ITS sequences. Korean J Plant Taxon. 35(1):7–23.

Related research

People also read lists articles that other readers of this article have read.

Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.

Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.