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Mitochondrial DNA Part B
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Volume 5, 2020 - Issue 2
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Mitogenome Announcement

The complete mitochondrial genome of Ophiura kinbergi (Ophiuroidea, Ophiurina): genome structure and phylogenetics

Yi-Xuan LiKey Laboratory of Science and Engineering for Marine Ecology and Environment, The First Institute of Oceanography, Ministry of Natural Resources, Qingdao, Shandong, People’s Republic of China; View further author information
,
Xue-Tao WangKey Laboratory of Science and Engineering for Marine Ecology and Environment, The First Institute of Oceanography, Ministry of Natural Resources, Qingdao, Shandong, People’s Republic of China; View further author information
,
Yue DongKey Laboratory of Science and Engineering for Marine Ecology and Environment, The First Institute of Oceanography, Ministry of Natural Resources, Qingdao, Shandong, People’s Republic of China; View further author information
,
Shi-Liang FanKey Laboratory of Science and Engineering for Marine Ecology and Environment, The First Institute of Oceanography, Ministry of Natural Resources, Qingdao, Shandong, People’s Republic of China; ;Pilot National Laboratory for Marine Science and Technology, Qingdao National Laboratory for Marine Science and Technology, Qingdao, Shandong, People’s Republic of ChinaView further author information
&
Qin-Zeng XuKey Laboratory of Science and Engineering for Marine Ecology and Environment, The First Institute of Oceanography, Ministry of Natural Resources, Qingdao, Shandong, People’s Republic of China; ;Pilot National Laboratory for Marine Science and Technology, Qingdao National Laboratory for Marine Science and Technology, Qingdao, Shandong, People’s Republic of ChinaCorrespondence[email protected]
ORCID Iconhttp://orcid.org/0000-0003-3036-5361View further author information
ORCID Icon
Pages 1309-1310 | Received 22 Jan 2020, Accepted 11 Feb 2020, Published online: 05 Mar 2020

References

  • Bankevich A, Nurk S, Antipov D, Gurevich AA, Dvorkin M, Kulikov AS, Lesin VM, Nikolenko SI, Pham S, Prjibelski AD, et al. 2012. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J Comput Biol. 19(5):455–477.
  • Hahn C, Bachmann L, Chevreux B. 2013. Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads-a baiting and iterative mapping approach. Nucleic Acids Res. 41(13):e129.
  • Kalyaanamoorthy S, Minh BQ, Wong TKF, von Haeseler A, Jermiin LS. 2017. ModelFinder: fast model selection for accurate phylogenetic estimates. Nat Meth. 14(6):587–589.
  • Langmead B, Salzberg SL. 2012. Fast gapped-read alignment with Bowtie 2. Nat Meth. 9(4):357–359.
  • Liao YL. 2004. Fauna Sinica: Invertetrata Vol. 40, Echinodermata Ophiuroidea. Beijing, China: Science Press.
  • O’Hara TD, Stöhr S, Hugall AF, Thuy B, Martynov A. 2018. Morphological diagnoses of higher taxa in Ophiuroidea (Echinodermata) in support of a new classification. EJT. 416:1–35.
  • Ruby GJ, Bellare P, Derisi JL. 2013. PRICE: software for the targeted assembly of components of (Meta) genomic sequence data. Genes, Genomes, Genetics. 3:865–880.
  • Wick RR, Schultz MB, Zobel J, Holt KE. 2015. Bandage: interactive visualization of de novo genome assemblies. Bioinformatics. 31(20):3350–3352.
  • Zhen J, Cong J, Qu J, Hou J, G. Ch 2015. Research on antioxidant and antibacterial activity of polysaccharide in Ophiura kinbergi. China Brewing. 34(11):136–139. (in Chinese with English abstract)

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