Advanced search
Publication Cover
Mitochondrial DNA Part B
Resources
Volume 5, 2020 - Issue 2
Submit an article Journal homepage
760
Views
2
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

Analysis of the complete organellar genomes of Palmaria decipiens (Palmariaceae, Rhodophyta) from Antarctica confirms its taxonomic placement in the genus Palmaria

Danilo E. BustamanteInstituto de Investigación para el Desarrollo Sustentable de Ceja de Selva (INDES-CES), Universidad Nacional Toribio Rodríguez de Mendoza, Chachapoyas, Peru; Correspondence[email protected] [email protected]
ORCID Iconhttp://orcid.org/0000-0002-5979-6993View further author information
ORCID Icon,
Jeffery R. HugheyDivision of Mathematics, Science, and Engineering, Hartnell College, Salinas, CA, USA; ORCID Iconhttp://orcid.org/0000-0003-4053-9150View further author information
ORCID Icon,
Martha S. CalderonInstituto de Investigación para el Desarrollo Sustentable de Ceja de Selva (INDES-CES), Universidad Nacional Toribio Rodríguez de Mendoza, Chachapoyas, Peru; ;Laboratorio de Ecosistemas Marinos Antárticos y Sub-antárticos (LEMAS), Universidad de Magallanes, Punta Arenas, ChileORCID Iconhttp://orcid.org/0000-0003-3611-140XView further author information
ORCID Icon,
Andres MansillaLaboratorio de Ecosistemas Marinos Antárticos y Sub-antárticos (LEMAS), Universidad de Magallanes, Punta Arenas, ChileORCID Iconhttp://orcid.org/0000-0003-3505-7018View further author information
ORCID Icon,
Juan P. RodriguezLaboratorio de Ecosistemas Marinos Antárticos y Sub-antárticos (LEMAS), Universidad de Magallanes, Punta Arenas, ChileORCID Iconhttp://orcid.org/0000-0003-4910-3847View further author information
ORCID Icon &
Fabio MendezLaboratorio de Ecosistemas Marinos Antárticos y Sub-antárticos (LEMAS), Universidad de Magallanes, Punta Arenas, ChileORCID Iconhttp://orcid.org/0000-0002-1054-0743View further author information
ORCID Icon
Pages 1327-1328 | Received 22 Jan 2020, Accepted 20 Feb 2020, Published online: 04 Mar 2020

References

  • Becker S, Quartin ML, Campana GL, Bucolo P, Wiencke C, Bischof K. 2011. The biology of an Antarctic rhodophyte, Palmaria decipiens: recent advances. Antartic Sci. 23(5):419–430.
  • Costa JF, Lin SM, Macaya EC, Fernandez-Garcıa C, Verbruggen H. 2016. Chloroplast genomes as a tool to resolve red algal phylogenies: a case study in the Nemaliales. BMC Evol Biol. 16:205.
  • Dereeper A, Guignon V, Blanc G, Audic S, Buffet S, Chevenet F, Dufayard JF, Guindon S, Lefort V, Lescot M, et al. 2008. Phylogeny.fr: robust phylogenetic analysis for the non-specialist. Nucleic Acids Res. 36(Web Server):W465–W469.
  • Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30(4):772–780.
  • Kozlov AM, Darriba D, Flouri T, Morel B, Stamatakis A. 2019. RAxML-NG: a fast, scalable, and user-friendly tool for maximum likelihood phylogenetic inference. Bioinformatics. 35(21):4453–4455.
  • Kumagai Y, Tsubouchi R, Miyabe Y, Takeda T, Adachi K, Yasui H, Kishimura H. 2019. Complete sequence of mitochondrial DNA of red alga dulse Palmaria palmata (Linnaeus) Weber & Mohr in Japan. Mitochondrial DNA Part B. 4:3177–3178.
  • Lagesen K, Hallin PF, Rødland E, Stærfeldt HH, Rognes T, Ussery DW. 2007. RNammer: consistent annotation of rRNA genes in genomic sequences. Nucleic Acids Res. 35(9):3100–3108.
  • Li D, Luo R, Liu CM, Leung CM, Ting HF, Sadakane K, Yamashita H, Lam TW. 2016. MEGAHIT v1.0: a fast and scalable metagenome assembler driven by advanced methodologies and community practices. Methods. 102:3–11.
  • Ricker RW. 1987. Taxonomy and biogeography of Macquarie Island seaweeds. London: British Museum Press.
  • Saunders GW, Jackson C, Salomaki ED. 2018. Phylogenetic analyses of transcriptome data resolve familial assignments for genera of the red-algal Acrochaetiales-Palmariales complex (Nemaliophycidae). Mol Phylogenet Evol. 119:151–159.
  • Schattner P, Brooks AN, Lowe TM. 2005. The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs. Nucl Acids Res. 33:686–689.
  • Thiers B. 2016. Index Herbariorum: a global directory of public herbaria and associated staff. New York Botanical Garden’s Virtual Herbarium. [accessed 2020 Feb 24]. http://sweetgum.nybg.org/science/ih/.
  • Yang EC, Boo SM, Bhattacharya D, Saunders GW, Knoll AH, Fredericq S, Graf L, Yoon HS. 2016. Divergence time estimates and the evolution of major lineages in the florideophyte red algae. Sci Rep. 6(1):21361.

Related research

People also read lists articles that other readers of this article have read.

Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.

Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.