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Mitochondrial DNA Part B
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Volume 5, 2020 - Issue 2
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Mitogenome Announcement

Characterization of the complete chloroplast genome of Roscoea alpina (Zingiberaceae), a medicinal plant in southwest of China

Ai-en TaoCollege of Pharmacy and Chemistry, Dali University, Dali, China; ;School of Medicine, Tourism and Culture College of Yunnan University, Lijiang, China; ;Key Laboratory of Yunnan Provincial Higher Education Institutions for Development of Yunnan Daodi Medicinal Materials Resources, Dali, China
,
Fei-ya ZhaoCollege of Pharmacy and Chemistry, Dali University, Dali, China; ;School of Medicine, Tourism and Culture College of Yunnan University, Lijiang, China; ;Key Laboratory of Yunnan Provincial Higher Education Institutions for Development of Yunnan Daodi Medicinal Materials Resources, Dali, China
,
Jin-fu QianCollege of Pharmacy and Chemistry, Dali University, Dali, China; ;School of Medicine, Tourism and Culture College of Yunnan University, Lijiang, China;
&
Cong-long XiaCollege of Pharmacy and Chemistry, Dali University, Dali, China; ;Key Laboratory of Yunnan Provincial Higher Education Institutions for Development of Yunnan Daodi Medicinal Materials Resources, Dali, ChinaCorrespondence[email protected]
Pages 1487-1488 | Received 27 Feb 2020, Accepted 08 Mar 2020, Published online: 20 Mar 2020

References

  • Bolger AM, Lohse M, Usadel B. 2014. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics. 30(15):2114–2120.
  • Doyle J, 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull. 1. 11–15.
  • Greiner S, Lehwark P, Bock R. 2019. OrganellarGenomeDRAW (OGDRAW) version 1.3.1: expanded toolkit for the graphical visualization of organellar genomes. Nucleic Acids Res. 47(W1):W59–W64.
  • Minru J, Yi Z. 2016. Dictionary of Chinese ethnic medicine. Beijing: China Medical Science and Technology Press.
  • Jiangsu New Medical College. 1977. Dictionary of Chinese Materia Medical (In Chinese). Shanghai: Science and Technology Press of Shanghai.
  • Jin JJ, Yu WB, Yang JB, Song Y, Yi TS, Li DZ. 2018. GetOrganelle: a simple and fast pipeline for de novo assembly of a complete circular chloroplast genome using genome skimming data. bioRxiv. :1–11.
  • Katoh K, Standley D. 2013. MAFFT multiple sequence alignment software version improvements in performance and usability. Mol Biol Evol. 30(4):772–780.
  • Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, et al. 2012. Geneious basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics. 28(12):1647–1649.
  • Kumar S, Stecher G, Tamura K. 2016. MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Mol Biol Evol. 33(7):1870–1874.
  • Li HW, Ian CH. 1994. Zingiberaceae. In: Wu ZY and Raven PH, editors. Flora of China (17th). Beijing: Science Press.
  • Lowe TM, Chan PP. 2016. tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes. Nucleic Acids Res. 44(W1):W54–57.
  • Minghua L, Huailong W, Honghui L. 2008. Species and distribution of roscoea in china and their medicinal uses. Chinese Wild Plant Resources. :35–37 + 41.
  • Paudel BR, Dyer AG, Garcia JE, Shrestha M. 2019. The effect of elevational gradient on alpine gingers (Roscoea alpina and R. purpurea) in the Himalayas. PeerJ 7:e7503. doi:10.7717/peerj.7503
  • Wyman SK, Jansen RK, Boore JL. 2004. Automatic annotation of organellar genomes with DOGMA. Bioinformatics. 20(17):3252–3255.
  • Yang JB, Li DZ, Li HT. 2014. Highly effective sequencing whole chloroplast genomes of angiosperms by nine novel universal primer pairs. Mol Ecol Resour. 14:1024–1031.

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