Advanced search
Publication Cover
Mitochondrial DNA Part B
Resources
Volume 5, 2020 - Issue 2
Submit an article Journal homepage
552
Views
0
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

The complete chloroplast genome of Juglans cathayensis var. formosana (Hayata), an endemic in China

Qing-guo MaState Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of National Forestry and Grassland Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China; View further author information
,
Yong HuangFujian Academy of Forestry Sciences, Fuzhou, ChinaView further author information
,
Xiao-bo SongState Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of National Forestry and Grassland Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China; View further author information
,
Ying-ying ChangState Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of National Forestry and Grassland Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China; View further author information
&
Dong PeiState Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of National Forestry and Grassland Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China; Correspondence[email protected]
ORCID Iconhttp://orcid.org/0000-0001-8937-1913View further author information
ORCID Icon
Pages 1802-1803 | Received 18 Mar 2020, Accepted 27 Mar 2020, Published online: 11 Apr 2020

References

  • Bolger AM, Lohse M, Usadel B. 2014. Trimmomatic: a flexible trimmer for Illumina Sequence Data. Bioinformatics. 30(15):2114–2120.
  • Dong W, Xu C, Li W, Xie X, Lu Y, Liu Y, Jin X, Suo Z. 2017. Phylogenetic resolution in Juglans based on complete chloroplast genomes and nuclear DNA sequences. Front Plant Sci. 8:1148.
  • Hu Y, Chen X, Feng X, Woeste KE, Zhao P. 2016. Characterization of the complete chloroplast genome of the Endangered species Carya sinensis (Juglandaceae). Conservation Genet Resour. 8(4):467–470.
  • Hu Y, Woeste KE, Zhao P. 2017. Completion of the chloroplast genomes of five Chinese Juglans and their contribution to chloroplast phylogeny. Front Plant Sci. 7:1955.
  • Hu Y, Yan J, Feng X, Dang M, Woeste KE, Zhao P. 2017. Characterization of the complete chloroplast genome of wheel wingnut (Cyclocarya paliurus), an endemic in China. Conservation Genet Resour. 9(2):273–275.
  • Huang DI, Cronk Q. 2015. Plann: a command–line application for annotating plastome sequences. Appl Plant Sci. 3(8):1500026.
  • Jackman SD, Vandervalk BP, Mohamadi H, Chu J, Yeo S, Hammond SA, Jahesh G, Khan H, Coombe L, Warren RL, et al. 2017. ABySS 2.0: resource-efficient assembly of large genomes using a Bloom filter. Genome Res. 27(5):768–777.
  • Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30(4):772–780.
  • Lee E, Harris N, Gibson M, Chetty R, Lewis S. 2009. Apollo: a community resource for genome annotation editing. Bioinformatics. 25(14):1836–1837.
  • Stamatakis A. 2014. Raxml version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 30(9):1312–1313.
  • Wang H, Pan G, Ma QG, Zhang JP, Pei D. 2015. The genetic diversity and introgression of Juglans regia and J. sigillata in Tibet as revealed by SSR markers. Tree Genet Genomes. 11(1):1
  • Yan J, Han K, Zeng S, Zhao P, Woeste K, Li J, Liu ZL. 2017. Characterization of the complete chloroplast genome of Platycarya strobilacea (Juglandaceae). Conservation Genet Resour. 9(1):79–81.
  • Ye L, Fu C, Wang Y, Liu J, Gao L. 2018. Characterization of the complete plastid genome of a Chinese endemic species Carya kweichowensis. Mitochondrial DNA B. 3(2):492–493.

Related research

People also read lists articles that other readers of this article have read.

Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.

Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.