1,145
Views
2
CrossRef citations to date
0
Altmetric
MitoGenome Announcement

Mitochondrial genome of Apis mellifera anatoliaca (Hymenoptera: Apidae) – the Anatolian honey bee

ORCID Icon, ORCID Icon, ORCID Icon, , &
Pages 1876-1877 | Received 17 Mar 2020, Accepted 27 Mar 2020, Published online: 16 Apr 2020

References

  • Andrews S. 2010. FastQC: a quality control tool for high throughput sequence data. [Accessed 2018 Aug]. https://www.bioinformatics.babraham.ac.uk/projects/fastqc/
  • Bernt M, Pütz J, Florentz C, Donath A, Jühling F, Stadler PF, Externbrink F, Fritzsch G, Middendorf M. 2013. MITOS: improved de novo metazoan mitochondrial genome annotation. Mol Phylogenet E. 69(2):313–319.
  • Boardman L, Eimanifar A, Kimball RT, Braun EL, Fuchs S, Grünewald B, Ellis JD. 2019. The complete mitochondrial genome of Apis mellifera unicolor (Insecta: Hymenoptera: Apidae), the Malagasy honey bee. Mitochondrial DNA Part B. 4(2):3286–3287.
  • Bolger AM, Lohse M, Usadel B. 2014. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics. 30(15):2114–2120.
  • Eimanifar A, T. Kimball R, L. Braun E, Fuchs S, Grünewald B, Ellis JD. 2017. The complete mitochondrial genome of Apis mellifera meda (Insecta: Hymenoptera: Apidae). Mitochondrial DNA Part B. 2(1):268–269.
  • Kandemir I, Kence M, Kence A. 2000. Genetic and morphometric variation in honeybee (Apis mellifera L.) populations of Turkey. Apidologie. 31(3):343–356.
  • Kandemir I, Kence M, Sheppard WS, Kence A. 2006. Mitochondrial DNA variation in honey bee (Apis mellifera L.) populations from Turkey. J Apic Res. 45(1):33–38.
  • Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, et al. 2012. Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics. 28(12):1647–1649.
  • Kekecoglu M, Bouga M, Soysal MI, Harizanis P. 2009. Genetic divergence and phylogenetic relationships of honey bee populations from turkey using PCR-RFLP’S analysis of two mtDNA segments. Bulg J Agric Sci. 15(6):589–597.
  • Maddison WP, Maddison DR. 2018. Mesquite: a modular system for evolutionary analysis. Version 3.5. [Accessed 2018 Aug]. https://www.mesquiteproject.org/
  • Miller MA, Pfeiffer W, Schwartz T. 2010. Creating the CIPRES science gateway for inference of large phylogenetic trees. Proceedings of the Gateway Computing Environments Workshop (GCE); New Orleans, LA; p. 1–8.
  • Özdil F, Aytekin I, Ilhan F, Boztepe S. 2012. Genetic variation in Turkish honeybees Apis mellifera anatoliaca, A. m. caucasica, A. m. meda (Hymenoptera: Apidae) inferred from RFLP analysis of three mtDNA regions (16S rDNA-COI-ND5). Eur J Entomol. 109(2):161–167.
  • Palmer MR, Smith DR, Kaftanoglu O. 2000. Turkish honeybees: genetic variation and evidence for a fourth lineage of Apis mellifera mtDNA. J Hered. 91(1):42–46.
  • Ruttner F. 1988. Biogeography and taxonomy of honeybees. Berlin, Germany: Springer.
  • Smith DR, Slaymaker A, Palmer M, Kaftanoğlu O. 1997. Turkish honey bees belong to the east Mediterranean mitochondrial lineage. Apidologie. 28(5):269–274.
  • Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 30(9):1312–1313.
  • Swofford DL. 2003. PAUP*. Phylogenetic analysis using parsimony (*and Other Methods). Version 4. Sunderland, MA: Sinauer Associates.