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Mitogenome Announcement

The chloroplast genome of the pincushion cactus Mammilllaria haageana subsp. san-angelensis, a Mexican endangered species

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Pages 2038-2039 | Received 24 Jan 2020, Accepted 07 Mar 2020, Published online: 12 May 2020

References

  • Arias S. 2009. La familia Cactaceae. Biodiversidad del ecosistema del Pedregal de San Ángel. México (DF): Universidad Nacional Autónoma de México. p. 135–140.
  • Bolger AM, Lohse M, Usadel B. 2014. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics. 30(15):2114–2120.
  • Dierckxsens N, Mardulyn P, Smits G. 2016. NOVOPlasty: de novo assembly of organelle genomes from whole genome data. Nucleic Acids Res. 45(4):e18.
  • Hernandez HM, Godinez H. 1994. Contribución al conocimiento de las cactáceas mexicanas amenazadas. Acta Bot Mex. 26:33–52.
  • Katoh K, Rozewicki J, Yamada KD. 2019. MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization. Brief Bioinform. 20(4):1160–1166.
  • Nguyen LT, Schmidt HA, von Haeseler A, Minh BQ. 2015. IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol. Biol. Evol. 32:268–274.
  • Solórzano S, Chincoya DA, Sanchez-Flores A, Estrada K, Díaz-Velásquez CE, González-Rodríguez A, Vaca-Paniagua F, Dávila P, Arias S. 2019. De novo assembly discovered novel structures in genome of plastids and revealed divergent inverted repeats in Mammillaria (Cactaceae, Caryophyllales). Plants. 8(10):392.
  • Tillich M, Lehwark P, Pellizzer T, Ulbricht-Jones ES, Fischer A, Bock R, Greiner S. 2017. GeSeq–versatile and accurate annotation of organelle genomes. Nucleic Acids Res. 45(W1):W6–W11.
  • Valverde T, Chávez VM. 2009. Mammillaria (Cactaceae) como indicadora del estado de conservación del ecosistema. Biodiversidad del ecosistema del Pedregal de San Ángel. México (DF): Universidad Nacional Autónoma de México. p. 497–507.
  • Villaseñor JL. 2016. Checklist of the native vascular plants of Mexico. Revista Mexicana de Biodiversidad. 87(3):559–902.