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Mitochondrial DNA Part B
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Volume 5, 2020 - Issue 2
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Mitogenome Announcement

Phylogenetic analysis of the complete chloroplast genome of Betula hainanensis (Betulaceae)

Mingyu YinResearch Institute of Tropical Forestry, Chinese Academy of Forestry, Guangdong, Guangzhou, China; ;Forestry college, Nanjing Forestry University, Nanjing, ChinaView further author information
,
Junjie GuoResearch Institute of Tropical Forestry, Chinese Academy of Forestry, Guangdong, Guangzhou, China; View further author information
&
Jie ZengResearch Institute of Tropical Forestry, Chinese Academy of Forestry, Guangdong, Guangzhou, China; Correspondence[email protected]
View further author information
Pages 2018-2019 | Received 20 Mar 2020, Accepted 08 Apr 2020, Published online: 29 Apr 2020

References

  • Bankevich A, Nurk S, Antipov D, Gurevich AA, Dvorkin M, Kulikov AS, Lesin VM, Nikolenko SI, Pham S, Prjibelski AD, et al. 2012. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J Comput Biol. 19(5):455–477.
  • Huang DI, Cronk Q. 2015. Plann: a command-line application for annotating plastome sequences. Appl Plant Sci. 3(8):1500026.
  • Kalyaanamoorthy S, Minh BQ, Wong TKF, von Haeseler A, Jermiin LS. 2017. ModelFinder: fast model selection for accurate phylogenetic estimates. Nat Methods. 14(6):587–589.
  • Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30(4):772–780.
  • Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, et al. 2012. Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics. 28(12):1647–1649.
  • Nguyen LT, Schmidt HA, von Haeseler A, Minh BQ. 2015. IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol Biol Evol. 32(1):268–274.
  • Yin MY, Guo JJ, Zeng J. 2019. Complete chloroplast genome sequence of Betula alnoides (Betulaceae). Mitochondr DNA B. 4(2):2409–2410.
  • Zeng J, Ren BQ, Zhu JY, Chen ZD. 2014. Betula hainanensis (Betulaster, Betulaceae), a new species from Hainan Island, China. Ann Bot Fennici. 51(6):399–402.
  • Zeng J, Zou YP, Bai JY, Zheng HS. 2002. Preparation of total DNA from ‘recalcitrant plant taxa. Acta Bot Sin. 44:694–697.

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