1,495
Views
2
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

The complete mitochondrial and plastid genomes of the invasive marine red alga Caulacanthus okamurae (Caulacanthaceae, Rhodophyta) from Moss Landing, California, USA

, , , , , ORCID Icon, ORCID Icon, , , , , , , , , , , , , , , , , ORCID Icon, , , , , , , , , , , , , , , , , , , , , , , , , , , , & show all
Pages 2067-2069 | Received 20 Apr 2020, Accepted 25 Apr 2020, Published online: 13 May 2020

References

  • Boc A, Diallo AB, Makarenkov V. 2012. T-REX: a web server for inferring, validating and visualizing phylogenetic trees and networks. Nucleic Acids Res. 40(W1):W573–W579.
  • Dereeper A, Guignon V, Blanc G, Audic S, Buffet S, Chevenet F, Dufayard JF, Guindon S, Lefort V, Lescot M, et al. 2008. Phylogeny. fr: robust phylogenetic analysis for the non-specialist. Nucleic Acids Res. 36(Web Server):W465–W469.
  • Fofonoff PW, Ruiz GM, Steves B, Simkanin C, Carlton JT. 2020. National exotic marine and estuarine species information system. Smithsonian Environmental Research Center; [cited 2020 Mar 10]. http://invasions.si.edu/nemesis/.
  • Janouškovec J, Liu SL, Martone PT, Carré W, Leblanc C, Collén J, Keeling PJ. 2013. Evolution of red algal plastid genomes: ancient architectures, introns, horizontal gene transfer, and taxonomic utility of plastid markers. PLOS One. 8(3):e59001.
  • Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30(4):772–780.
  • Li D, Liu CM, Luo R, Sadakane K, Lam TW. 2015. MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph. Bioinformatics. 31(10):1674–1676.
  • Lindstrom SC, Hughey JR, Martone PT. 2011. New, resurrected and redefined species of Mastocarpus (Phyllophoraceae, Rhodophyta) from the northeast Pacific. Phycologia. 50(6):661–683.
  • Schattner P, Brooks AN, Lowe TM. 2005. The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs. Nucl Acids Res. 33:686–689.
  • Sissini MN, Navarrete-Fernández TM, Murray EM, Freese JM, Gentilhomme AS, Huber SR, Mumford TF, Hughey JH. 2016. Mitochondrial and plastid genome analysis of the heteromorphic red alga Mastocarpus papillatus (C. Agardh) Kützing (Phyllophoraceae, Rhodophyta) reveals two characteristic florideophyte organellar genomes. Mitochondrial DNA Part B. 1(1):676–677.
  • West JA, Calumpong H. 1990. New records of marine algae from the Philippines. Micronesica. 23:181–190.
  • Yamada Y. 1933. Notes on some Japanese algae V. J Fac Sci Hokkaido Univ Ser V Bot. 2:277–285.
  • Yang EC, Kim KM, Kim SY, Lee J, Boo GH, Lee JH, Nelson WA, Yi G, Schmidt WE, Fredericq S, et al. 2015. Highly conserved mitochondrial genomes among multicellular red algae of the florideophyceae. Genome Biol Evol. 7(8):2394–2406.
  • Zuccarello GC, West J, Rueness J. 2002. Phylogeography of the cosmopolitan red alga Caulacanthus ustulatus (Caulacanthaceae, Gigartinales). Phycological Res. 50(2):163–172.