Advanced search
Publication Cover
Mitochondrial DNA Part B
Resources
Volume 5, 2020 - Issue 3
Submit an article Journal homepage
552
Views
2
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

The complete mitochondrial genome sequence and phylogenetic analysis of Cantharis plagiata (Coleoptera, Canthridae)

Hua-Cong XiThe Key Laboratory of Zoological Systematics and Application, College of Life Sciences, Institute of Life Science and Green Development, Hebei University, Baoding, Hebei Province, ChinaView further author information
,
Shu-Juan GeThe Key Laboratory of Zoological Systematics and Application, College of Life Sciences, Institute of Life Science and Green Development, Hebei University, Baoding, Hebei Province, ChinaView further author information
,
Zi-Xuan KangThe Key Laboratory of Zoological Systematics and Application, College of Life Sciences, Institute of Life Science and Green Development, Hebei University, Baoding, Hebei Province, ChinaView further author information
,
Hao-Yu LiuThe Key Laboratory of Zoological Systematics and Application, College of Life Sciences, Institute of Life Science and Green Development, Hebei University, Baoding, Hebei Province, ChinaCorrespondence[email protected]
View further author information
&
Yu-Xia YangThe Key Laboratory of Zoological Systematics and Application, College of Life Sciences, Institute of Life Science and Green Development, Hebei University, Baoding, Hebei Province, ChinaCorrespondence[email protected]
View further author information
Pages 2386-2388 | Received 19 May 2020, Accepted 24 May 2020, Published online: 08 Jun 2020

References

  • Amaral DT, Mitani Y, Ohmiya Y, Viviani VR. 2016. Organization and comparative analysis of the mitochondrial genomes of bioluminescent Elateroidea (Coleoptera: Polyphaga). Gene. 586(2):254–262.
  • Andújar C, Arribas P, Linard B, Kundrata R, Bocák L, Volger AP. 2017. The mitochondrial genome of Iberobaenia (Coleoptera: Iberobaenidae): first rearrangement of protein coding genes in the beetles. Mitochondrial DNA A. 28(2):156–158..
  • Bininda-Emonds O. 2005. transAlign: using amino acids to facilitate the multiple alignment of protein-coding DNA sequences . BMC Bioinformatics. 6:156.
  • Fallon TR, Lower SE, Chang CH, Bessho-Uehara M, Martin GJ, Bewick AJ, Behringer M, Debat HJ, Wong I, Day JC, et al. 2018. Firefly genomes illuminate parallel origins of bioluminescence in beetles. eLife. 7:e36495.
  • Gerritsen AT, New DD, Robison BD, Rashed A, Hohenlohe P, Forney L, Rashidi M, Wilson CM, Settles ML. 2016. Full mitochondrial genome sequence of the sugar beet wireworm, Limonius californicus (Coleoptera: Elateridae), a common agricultural pest. Genome Announc. 4(1):e01628–15.
  • Kazantsev SV, Branucci M. 2007. Cantharidae. In: Löbl I, Smetana A, editors. Catalogue of Palaearctic Coleoptera, Vol. 4. Stenstrup: Apollo Books; p. 234–298.
  • Li X, Ogoh K, Ohba N, Liang X, Ohmiya Y. 2007. Mitochondrial genomes of two luminous beetles, Rhagophthalmus lufengensis and R. ohbai (Arthropoda, Insecta, Coleoptera). Gene. 392(1-2):196–205.
  • Linard B, Arribas P, Andújar C, Crampton-Platt A, Vogler AP. 2016. Lessons from genome skimming of arthropod-preserving ethanol. Mol Ecol Resour. 16(6):1365–1377.
  • Linard B, Crampton-Platt A, Moriniere J, Timmermans MJTN, Andújar C, Arribas P, Miller KE, Lipecki J, Favreau E, Hunter A, et al. 2018. The contribution of mitochondrial metagenomics to large-scale data mining and phylogenetic analysis of Coleoptera. Mol Phylogenet Evol. 128:1–11.
  • Liu H, Kang Z, Zhang F, Ge X, Yang Y. 2019. The complete mitogenome of Lycostomus sp. (Elateroidea: Lycidae). Mitochondrial DNA B. 4(2):3813–3815.
  • Schattner P, Brooks AN, Lowe TM. 2005. The tRNA scan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs. Nucleic Acids Res. 33:686–689.
  • Sheffield NC, Song H, Cameron SL, Whiting MF. 2009. Nonstationary evolution and compositional heterogeneity in beetle mitochondrial phylogenomics. Syst Biol. 58(4):381–394.
  • Timmermans MJ, Barton C, Haran J, Ahrens D, Culverwell CL, Ollikainen A, Dodsworth S, Foster PG, Bocák L, Vogler AP. 2015. Family-level sampling of mitochondrial genomes in Coleoptera: compositional heterogeneity and phylogenetics. Genome Biol Evol. 8(1):161–175.
  • Timmermans MJ, Dodsworth S, Culverwell CL, Bocák L, Ahrens D, Littlewood DT, Pons J, Vogler AP. 2010. Why barcode? High-throughput multiplex sequencing of mitochondrial genomes for molecular systematics. Nucleic Acids Res. 38(21):e197
  • Timmermans MJ, Vogler AP. 2012. Phylogenetically informative rearrangements in mitochondrial genomes of Coleoptera, and monophyly of aquatic elateriform beetles (Dryopoidea). Mol Phylogenet Evol. 63(2):299–304.
  • Uribe JE, Guti_ e, Rodr _ı. J. 2016. The complete mitogenome of the trilobite beetle Platerodrilus sp. (Elateroidea: Lycidae). Mitochondr DNA B. 1(1):658–659.
  • Vaidya G, Lohman DJ, Meier R. 2011. Sequence Matrix: concatenation softwarefor the fast assembly of multi-gene datasets with character set and codon information. Cladistics. 27(2):171–180.
  • Yang Y. 2010. Study on the Systematics of Cantharinae from China [unpublished, PhD dissertation]. Beijing: Chinese Academy of Sciences.
  • Yang Y, Yang X. 2018. Cantharidae. In: Yang X, editor. Insect fauna of the Qinling Mountains, Vol. 5. Xi’an: Xi’an World Publishing Corporation; p. 549–582.
  • Yu P, Henry C. 2012. IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth. Bioinformatics. 28:1420–1428.
  • Zhou X, Li Y, Liu S, Yang Q, Su X, Zhou L, Tang M, Fu R, Li J, Huang Q. 2013. Ultra-deep sequencing enables high-fidelity recovery of biodiversity for bulk arthropod samples without PCR amplification. Gigascience. 2(1):4.

Related research

People also read lists articles that other readers of this article have read.

Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.

Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.