Advanced search
Publication Cover
Mitochondrial DNA Part B
Resources
Volume 5, 2020 - Issue 3
Submit an article Journal homepage
512
Views
2
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

The complete chloroplast genome of Phlegmariurus phlegmaria, one representative species of genus Phlegmariurus

Li-Ming Tanga Forestry Department of Guangxi, Nanning, PR ChinaView further author information
,
Ri-Hong Jiangb Key Laboratory of Central South Fast-growing Timber Cultivation of Forestry Ministry of China, Guangxi Key Laboratory of Superior Timber Trees Resource Cultivation, Guangxi Forestry Research Institute, Nanning, PR ChinaView further author information
&
Jia-Cheng Anb Key Laboratory of Central South Fast-growing Timber Cultivation of Forestry Ministry of China, Guangxi Key Laboratory of Superior Timber Trees Resource Cultivation, Guangxi Forestry Research Institute, Nanning, PR ChinaCorrespondence[email protected]
View further author information
Pages 3418-3419 | Received 11 Aug 2020, Accepted 02 Sep 2020, Published online: 29 Sep 2020

References

  • Capella-Gutierrez S, Silla-Martinez JM, Gabaldon T. 2009. TrimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses. Bioinformatics. 25(15):1972–1973.
  • Field AR, Testo W, Bostock PD, Holtum JAM, Waycott M. 2016. Molecular phylogenetics and the morphology of the Lycopodiaceae subfamily Huperzioideae supports three genera: Huperzia, Phlegmariurus and Phylloglossum. Mol Phylogenet Evol. 94(Pt B):635–657.
  • Jin YW, Yang JB, Song Y, Yin TS, Li DZ. 2018. Get Organelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes. bioRxiv. 256479.
  • Kalyaanamoorthy S, Minh BQ, Wong TKF, von Haeseler A, Jermiin LS. 2017. ModelFinder: fast model selection for accurate phylogenetic estimates. Nat Methods. 14(6):587–589.
  • Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30(4):772–780.
  • Luo T, Li Y, Yuan X, Wang Y. 2019. The complete chloroplast genome sequence of Phlegmariurus carinatus. Mitochondrial DNA Part B. 4(2):3977–3978.
  • Øllgaard B. 2015. Six new species and some nomenclatural changes in neotropical Lycopodiaceae. Nordic J Bot. 33(2):186–196.
  • PPGI. 2016. A community-derived classification for extant lycophytes and ferns. J Syst E. 54:563–603.
  • Nguyen LT, Schmidt HA, von Haeseler A, Minh BQ. 2015. IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol Biol Evol. 32(1):268–274.
  • Tillich M, Lehwark P, Pellizzer T, Ulbricht-Jones ES, Fischer A, Bock R, Greiner S. 2017. GeSeq – versatile and accurate annotation of organelle genomes. Nucleic Acids Res. 45(W1):W6–W11.
  • Wagner WH, Beitel JM. 1992. Generic classification of modern North American Lycopodiaceae. Ann Mo Bot Gard. 79(3):676–686.
  • Wick RR, Schultz MB, Zobel J, Holt KE. 2015. Bandage: interactive visualization of de novo genome assemblies. Bioinformatics. 31(20):3350–3352.
  • Wikström N, Kenrick P. 2000. Phylogeny of epiphytic Huperzia (Lycopodiaceae): paleotropical and neotropical clades corroborated by rbcL sequences. Nordic J Bot. 20(2):165–171.
  • Zhang HR, Kang JS, Viane RLL, Zhang XC. 2017. The complete chloroplast genome sequence of Huperzia javanica (sw.) C.Y.Yang in Lycopodiaceae. Mitochondrial DNA B. 2(1):216–218.

Related research

People also read lists articles that other readers of this article have read.

Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.

Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.