1,074
Views
2
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

Complete chloroplast genome sequence of the rose apple, Syzygium jambos (Myrtaceae)

, &
Pages 3460-3462 | Received 17 Aug 2020, Accepted 09 Sep 2020, Published online: 05 Oct 2020

References

  • Abreu-Harbich LV, Labaki LC, Matzarakis A. 2015. Effect of tree planting design and tree species on human thermal comfort in the tropics. Landscape Urban Plan. 138:99–109.
  • Biffin E, Craven LA, Crisp MD, Gadek PA. 2006. Molecular systematics of Syzygium and allied genera (Myrtaceae): evidence from the chloroplast genome. Taxon. 55(1):79–94.
  • Biffin E, Lucas E, Craven L, Ribeiro da Costa I, Harrington M, Crisp M. 2010. Evolution of exceptional species richness among lineages of fleshy-fruited Myrtaceae. Ann Bot. 106(1):79–93.
  • Dierckxsens N, Mardulyn P, Smits G. 2017. NOVOPlasty: de novo assembly of organelle genomes from whole genome data. Nucleic Acids Res. 45(4):e18
  • Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32(5):1792–1797.
  • El-Shouny WA, Ali SS, Hegazy HM, Elnabi MKA, Ali A, Sun J. 2020. Syzygium aromaticum L.: Traditional herbal medicine against cagA and vacA toxin genes-producing drug resistant Helicobacter pylori. J Tradit Complement Med. 10(4):366–377.
  • Gavillán-Suárez J, Aguilar-Perez A, Rivera-Ortiz N, Rodríguez-Tirado K, Figueroa-Cuilan W, Morales-Santiago L, Maldonado-Martínez G, Cubano LA, Martínez-Montemayor MM. 2015. Chemical profile and in vivo hypoglycemic effects of Syzygium jambos, Costus speciosus and Tapeinochilos ananassae plant extracts used as diabetes adjuvants in Puerto Rico. BMC Complem Altern M. 15:244.
  • Guedes CM, Pinto AB, Moreira RFA, Maria CAB. 2004. Study of the aroma compounds of rose apple (Syzygium jambos Alston) fruit from Brazil. Eur Food Res Technol. 219:460–464.
  • Hao Y, Chen F, Wu G, Gao W. 2016. Impact of postharvest nitric oxide treatment on lignin biosynthesisrelated genes in wax apple (Syzygium samarangense) fruit. J Agric Food Chem. 64(45):8483–8490.
  • Jansen RK, Cai Z, Raubeson LA, Daniell H, Depamphilis CW, Leebens-Mack J, Müller KF, Guisinger-Bellian M, Haberle RC, Hansen AK, et al. 2007. Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns. Proc Natl Acad Sci Usa. 104(49):19369–19374.
  • Lim TK. 2012. Myrtaceae, Syzygium jambos. In Edible medicinal and non-medicinal plants: fruits. Vol. 3. London, New York: Dordrecht Heidelberg; p. 765.
  • Liu J, Ni S, Zheng C, Shi C, Niu Y. 2018. Chloroplast genome of tropical and sub-tropical fruit tree Syzygium samarangense (Myrtaceae). Mitochondrial DNA B. 3(2):890–891.
  • Moore MJ, Soltis PS, Bell CD, Burleigh JG, Soltis DE. 2010. Phylogenetic analysis of 83 plastid genes further resolves the early diversification of eudicots. Proc Natl Acad Sci Usa. 107(10):4623–4628.
  • Murugan S, Uma Devi P, Parameswari NK, Mani KR. 2011. Antimicrobial activity of Syzygium jambos against selected human pathogens. Int J Pharma Pharmaceut Sci. 3:45–47.
  • Nguyen LT, Schmidt HA, von Haeseler A, Minh BQ. 2015. IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol Biol Evol. 32(1):268–274.
  • Oliveira AC, Endringer DC, Amorim LA, das Gracas LBM, Coelho MM. 2005. Effect of the extracts and fractions of Baccharis trimera and Syzygium cumini on glycaemia of diabetic and non-diabetic mice. J Ethnopharmacol. 102(3):465–469.
  • Qu X, Moore MJ, Li D, Yi T. 2019. PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes. Plant Methods. 15: 50.
  • Rezende WP, Borges LL, Alves NM, Ferri PH, Paula JR. 2013. Chemical variability in the essential oils from leaves of Syzygium jambos. Revista Brasileira de Farmacognosia. 23(3):433–440.
  • Soh WK, Parnell J. 2015. A revision of Syzygium Gaertn. (Myrtaceae) in Indochina (Cambodia, Laos and Vietnam). Adansonia, Sér. 37:179–275.
  • Thornhill AH, Ho SY, Kulheim C, Crisp MD. 2015. Interpreting the modern distribution of Myrtaceae using a dated molecular phylogeny. Mol Phylogenet Evol. 93:29–43.
  • Tillich M, Lehwark P, Pellizzer T, Ulbricht-Jones ES, Fischer A, Bock R, Greiner S. 2017. GeSeq - versatile and accurate annotation of organelle genomes. Nucleic Acids Res. 45(W1):W6–W11.
  • Zhang X, Wang J, Wang H, Zhao K, Zhu Z, Wang H. 2019. Complete plastome sequence of Syzygium forrestii Merr. et Perry (Myrtaceae): an endemic species in China. Mitochondrial DNA B. 4(1):126–127.