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Mitochondrial DNA Part B
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Volume 5, 2020 - Issue 3
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Mitogenome Announcement

Characterization of the complete chloroplast genome of Coelogyne fimbriata (Orchidaceae)

Qiu-Ping Wua Key Laboratory of Plant Resources Conservation and Sustainable Utilization, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, China;b University of Chinese Academy of Sciences, Beijing, ChinaORCID Iconhttps://orcid.org/0000-0002-6766-8684View further author information
ORCID Icon,
Jun-Wen Zhaic Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture, Fujian Agriculture and Forestry University, Fuzhou, ChinaView further author information
,
Kun-Lin Wua Key Laboratory of Plant Resources Conservation and Sustainable Utilization, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, China;b University of Chinese Academy of Sciences, Beijing, ChinaView further author information
,
Lin Fanga Key Laboratory of Plant Resources Conservation and Sustainable Utilization, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, China;b University of Chinese Academy of Sciences, Beijing, ChinaView further author information
,
Song-Jun Zenga Key Laboratory of Plant Resources Conservation and Sustainable Utilization, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, China;b University of Chinese Academy of Sciences, Beijing, ChinaCorrespondence[email protected]
View further author information
&
Lin Lia Key Laboratory of Plant Resources Conservation and Sustainable Utilization, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, China;b University of Chinese Academy of Sciences, Beijing, ChinaCorrespondenceLin Li [email protected]
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Pages 3507-3509 | Received 14 Jul 2020, Accepted 17 Sep 2020, Published online: 07 Oct 2020

References

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  • Gravendeel B, Chase MW, de Vogel EF, Roos MC, Mes TH, Bachmann K. 2001. Molecular phylogeny of Coelogyne (Epidendroideae; Orchidaceae) based on plastid RFLPS, matK, and nuclear ribosomal ITS sequences: evidence for polyphyly. Am J Bot. 88(10):1915–1927.
  • Jin JJ, Yu WB, Yang JB, Song Y, Yi TS, Li DZ. 2018. GetOrganelle: a simple and fast pipeline for de novo assembly of a complete circular chloroplast genome using genome skimming data. bioRxiv. 256479.
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  • Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, et al. 2012. Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics. 28(12):1647–1649.
  • Nguyen LT, Schmidt HA, Haeseler AV, Minh BQ. 2015. IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol Biol Evol. 32(1):268–274.
  • Qu X-J, Moore MJ, Li D-Z, Yi T-S. 2019. PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes. Plant Methods. 15(1):50.
  • Swarts ND, Dixon KW. 2009. Terrestrial orchid conservation in the age of extinction. Ann Bot. 104(3):543–556.

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