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Mitochondrial DNA Part B
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Volume 5, 2020 - Issue 3
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Mitogenome Announcement

The complete chloroplast genome of Hippeastrum vittatum (Amaryllidaceae)

Peiling Lia College of Horticulture, Xinyang Agricultural and Forestry University, Xinyang, China;b Henan Key Laboratory of Tea Comprehensive Utilization in South Henan, Xinyang Agriculture and Forestry University, Xinyang, ChinaView further author information
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Maofei Rena College of Horticulture, Xinyang Agricultural and Forestry University, Xinyang, China;b Henan Key Laboratory of Tea Comprehensive Utilization in South Henan, Xinyang Agriculture and Forestry University, Xinyang, ChinaView further author information
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Qingsong Zhua College of Horticulture, Xinyang Agricultural and Forestry University, Xinyang, China;b Henan Key Laboratory of Tea Comprehensive Utilization in South Henan, Xinyang Agriculture and Forestry University, Xinyang, ChinaView further author information
,
Yan Zhanga College of Horticulture, Xinyang Agricultural and Forestry University, Xinyang, China;b Henan Key Laboratory of Tea Comprehensive Utilization in South Henan, Xinyang Agriculture and Forestry University, Xinyang, ChinaView further author information
,
Hanbing Xua College of Horticulture, Xinyang Agricultural and Forestry University, Xinyang, China;b Henan Key Laboratory of Tea Comprehensive Utilization in South Henan, Xinyang Agriculture and Forestry University, Xinyang, ChinaView further author information
,
Zhiyong Wanga College of Horticulture, Xinyang Agricultural and Forestry University, Xinyang, China;b Henan Key Laboratory of Tea Comprehensive Utilization in South Henan, Xinyang Agriculture and Forestry University, Xinyang, ChinaView further author information
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Songhu Liua College of Horticulture, Xinyang Agricultural and Forestry University, Xinyang, China;b Henan Key Laboratory of Tea Comprehensive Utilization in South Henan, Xinyang Agriculture and Forestry University, Xinyang, ChinaView further author information
,
Qin Chenga College of Horticulture, Xinyang Agricultural and Forestry University, Xinyang, China;b Henan Key Laboratory of Tea Comprehensive Utilization in South Henan, Xinyang Agriculture and Forestry University, Xinyang, ChinaView further author information
&
Benguo Lianga College of Horticulture, Xinyang Agricultural and Forestry University, Xinyang, China;b Henan Key Laboratory of Tea Comprehensive Utilization in South Henan, Xinyang Agriculture and Forestry University, Xinyang, ChinaCorrespondence[email protected]
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Pages 3521-3523 | Received 20 Jul 2020, Accepted 17 Sep 2020, Published online: 09 Oct 2020

References

  • Dierckxsens N, Mardulyn P, Smits G. 2016. NOVOPlasty: de novo assembly of organelle genomes from whole genome data. Nucl Acids Res. 45:e18.
  • Kalyaanamoorthy S, Bui MQ, Wong TKF, Von Haeseler A, Jermiin LS. 2017. ModelFinder: fast model selection for accurate phylogenetic estimates. Nat Methods. 14(6):587–589.
  • Nguyen L, Schmidt HA, Von Haeseler A, Minh BQ. 2015. IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol Biol Evol. 32(1):268–274.
  • Phuong Pham TM, Shiro I, Ikuo M. 2014. Genetic variation of Hippeastrum accessions in Vietnam. J Fac Agr Kyushu Univ. 59:235–241.
  • Poggio L, Gonzalez G, Naranjo CA. 2007. Chromosome studies in Hippeastrum (Amaryllidaceae): variation in genome size. Bot J Linn Soc. 155(2):171–178.
  • Robert B, Jordheim M, Kiremire B, Namukobe J, Andersen ØM. 2006. Anthocyanins from flowers of Hippeastrum cultivars. Sci Hortic-Amsterdam. 109(3):262–266.
  • Rozewicki J, Li S, Amada KM, Standley DM, Katoh K. 2019. MAFFT-DASH: integrated protein sequence and structural alignment. Nucl Acids Res. 47(W1):W5–W10.
  • Shi L, Chen H, Jiang M, Wang L, Wu X, Huang L, Liu C. 2019. CPGAVAS2, an integrated plastome sequence annotator and analyzer. Nucl Acids Res. 47(W1):W65–W73.
  • Silva AFS, De Andrade JP, Machado KRB, Rocha AB, Apel MA, Sobral MEG, Henriques AT, Zuanazzi JAS. 2008. Screening for cytotoxic activity of extracts and isolated alkaloids from bulbs of Hippeastrum vittatum. Phytomedicine. 15(10):882–885.
  • Zhang F, Shu X, Wang T, Zhuang W, Wang Z. 2019. The complete chloroplast genome sequence of Lycoris radiata. Mitochondrial DNA B. 4(2):2886–2887.
  • Zhang F, Tong H, Yang H, Wang T, Zhuang W, Shu X, Wang Z. 2019. Characterisation of the complete chloroplast genome of Lycoris longituba (Amaryllidaceae). Mitochondrial DNA B. 4(2):3782–3783.

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