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Mitogenome Announcement

Complete chloroplast genome of Paphiopedilum emersonii (Orchidaceae)

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Pages 3500-3501 | Received 29 Aug 2020, Accepted 17 Sep 2020, Published online: 07 Oct 2020

References

  • Averyanov LV, Hiep N, Loc P. 2005. Two relatives of different ecology: a field study of Paphiopedilum emersonii and Paphiopedilum hangianum. Am Orchid Soc Mag. Orchids. 74:208–215.
  • Bi G, Mao Y, Xing Q, Cao M. 2018. HomBlocks: a multiple-alignment construction pipeline for organelle phylogenomics based on locally collinear block searching. Genomics. 110(1):18–22.
  • Chen XQ, Stephan W. 2009. Flora of China. Vol.25. Orchidaceae. Beijing (China): Science Press; St. Louis (MO): Botanical Garden Press. p. 36–37.
  • Chernomor O, von Haeseler A, Minh BQ. 2016. Terrace aware data structure for phylogenomic inference from supermatrices. Syst Biol. 65(6):997–1008.
  • Doyle JJ, Doyle JL. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull. 19:11–15.
  • Hall TA. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Sym- Posium Series. 41:95–98.
  • Jin JJ, Yu WB, Yng JB, Song Y, Yi TS, Li DZ. 2018. GetOrganelle: a simple and fast pipeline for de novo assembly of a complete circular chloroplast genome using genome skimming data. bioRxiv. 256479.
  • Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, et al. 2012. Geneious basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics. 28(12):1647–1649.
  • Lohse M, Drechsel O, Kahlau S, Bock R. 2013. OrganellarGenomeDRAW-a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets. Nucleic Acids Res. 41:W575–W581.
  • Luo YB, Jia JS, Wang CL. 2003. A general review of the conservation status of Chinese orchids. Biodivers Sci. 11(1):70–77.
  • Minh BQ, Nguyen MAT, von Haeseler A. 2013. Ultrafast approximation for phylogenetic bootstrap. Mol Biol Evol. 30(5):1188–1195.
  • Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 30(9):1312–1313.
  • Zeng SJ, Tian RX, Chen ZL, Wu KL, Duan J. 2010. Research progress on cross breeding of Paphiopedilum. J Tropical Subtropical Bot. 018(004):459–468.