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Mitochondrial DNA Part B
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Volume 5, 2020 - Issue 3
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Mitogenome Announcement

Complete mitochondrial genomes of Karchaev goat (Capra hircus)

Andrey N. Rodionova L.K. Ernst Federal Science Center for Animal Husbandry, Podolsk, RussiaView further author information
,
Arsen V. Dotseva L.K. Ernst Federal Science Center for Animal Husbandry, Podolsk, RussiaCorrespondence[email protected] [email protected]
ORCID Iconhttps://orcid.org/0000-0003-3418-2511View further author information
ORCID Icon,
Oleg Y. Fomenkoa L.K. Ernst Federal Science Center for Animal Husbandry, Podolsk, RussiaView further author information
,
Neckruz F. Bakoeva L.K. Ernst Federal Science Center for Animal Husbandry, Podolsk, RussiaView further author information
,
Tatiana E. Deniskovaa L.K. Ernst Federal Science Center for Animal Husbandry, Podolsk, RussiaORCID Iconhttps://orcid.org/0000-0002-5809-1262View further author information
ORCID Icon,
Alexey V. Shakhina L.K. Ernst Federal Science Center for Animal Husbandry, Podolsk, RussiaORCID Iconhttps://orcid.org/0000-0003-4959-878XView further author information
ORCID Icon,
Vugar A. Bagirova L.K. Ernst Federal Science Center for Animal Husbandry, Podolsk, RussiaView further author information
,
Elisabeth Kunzb Department of Veterinary Sciences, Ludwig-Maximilians-University, Munich, GermanyView further author information
,
Ivica Medugoracb Department of Veterinary Sciences, Ludwig-Maximilians-University, Munich, GermanyORCID Iconhttps://orcid.org/0000-0002-6891-3039View further author information
ORCID Icon,
Stefan Krebsc Gene Center, Ludwig-Maximilians-University, Munich, GermanyView further author information
,
Gottfried Brema L.K. Ernst Federal Science Center for Animal Husbandry, Podolsk, Russia;d Institute of Animal Breeding and Genetics, Vienna, AustriaORCID Iconhttps://orcid.org/0000-0002-7522-0708View further author information
ORCID Icon &
Natalia A. Zinovievaa L.K. Ernst Federal Science Center for Animal Husbandry, Podolsk, RussiaCorrespondence[email protected] [email protected]
ORCID Iconhttps://orcid.org/0000-0003-4017-6863View further author information
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Pages 3627-3628 | Received 12 Aug 2020, Accepted 28 Sep 2020, Published online: 27 Oct 2020

References

  • Bernt M, Donath A, Jühling F, Externbrink F, Florentz C, Fritzsch G, Pütz J, Middendorf M, Stadler PF. 2013. MITOS: improved de novo metazoan mitochondrial genome annotation. Mol Phylogenet Evol. 69(2):313–319.
  • Bodenhofer U, Bonatesta E, Horejs-Kainrath C, Hochreiter S. 2015. MSA: an R package for multiple sequence alignment. Bioinformatics. 31(15):2574– 9999.
  • Colli L, Lancioni H, Cardinali I, Olivieri A, Capodiferro MR, Pellecchia M, Rzepus M, Zamani W, Naderi S, Gandini F, et al. 2015. Whole mitochondrial genomes unveil the impact of domestication on goat matrilineal variability. BMC Genomics. 16:1115.
  • Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32(5):1792–1797.
  • Hassanin A, Delsuc F, Ropiquet A, Hammer C, Jansen van Vuuren B, Matthee C, Ruiz-Garcia M, Catzeflis F, Areskoug V, Nguyen TT, et al. 2012. Pattern and timing of diversification of Cetartiodactyla (Mammalia, Laurasiatheria), as revealed by a comprehensive analysis of mitochondrial genomes. C R Biol. 335(1):32–50.
  • Klenovitsky PM, Iolchiev BS, Bagirov VA, Zhilinsky MA, Onkorova NT, Shaidullin IN. 2018. Analysis of nucleoli in intact lymphocytes in domestic goat (Capra hircus L., 1758) and its hybrids with Siberian ibex (Capra sibirica L., 1758) and Caucasian tur (Capra caucasica Guldenstadt & Pallas, 1783). Veter Zootech Biotechnol. 4:98–103 (in Russian).
  • Lanfear R, Frandsen PB, Wright AM, Senfeld T, Calcott B. 2017. PartitionFinder 2: new methods for selecting partitioned models of evolution for molecular and morphological phylogenetic analyses. Mol Biol Evol. 34(3):772–773.
  • Li H, Durbin R. 2010. Fast and accurate long-read alignment with Burrows-Wheeler transform. Bioinformatics. 26(5):589–595.
  • Mamontova TV, Gadjiev ZK, Aybazov AM. 2012. The productivity of indigenous Karachaev goats. Sheep Goats Wool Craft. 2:25–27 (in Russian).
  • Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, Höhna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol. 61(3):539–542.

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