Advanced search
Publication Cover
Mitochondrial DNA Part B
Resources
Volume 5, 2020 - Issue 3
Submit an article Journal homepage
479
Views
2
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

The complete chloroplast genome of Douinia plicata (Lindb.) Konstant. & Vilnet (Scapaniaceae, Jungermanniales)

Hyun Min Buma Research Team on Ecological Natural Map, National Institute of Ecology, Seocheon, Republic of Korea;b Department of Life Science, Jeonbuk National University, Jeonju, Republic of KoreaView further author information
,
Hwan Kyu Kimb Department of Life Science, Jeonbuk National University, Jeonju, Republic of KoreaView further author information
,
Nam Shin Kima Research Team on Ecological Natural Map, National Institute of Ecology, Seocheon, Republic of KoreaView further author information
,
Woochan Kwonc InfoBoss Inc, Seoul, Republic of Korea;d InfoBoss Research Center, Seoul, Republic of KoreaORCID Iconhttps://orcid.org/0000-0001-8665-8097View further author information
ORCID Icon &
Jongsun Parkc InfoBoss Inc, Seoul, Republic of Korea;d InfoBoss Research Center, Seoul, Republic of KoreaCorrespondence[email protected]
ORCID Iconhttps://orcid.org/0000-0003-0786-4701View further author information
ORCID Icon
Pages 3680-3682 | Received 29 Aug 2020, Accepted 30 Sep 2020, Published online: 09 Nov 2020

References

  • Bakalin VA. 2010. Hepaticae of the Kuril Islands (northwestern Pacific): a transoceanic route from circumboreal to East Asian flora. Ann Bot Fennici. 47(2):81–105.
  • Choi SS, Bakalin VA, Sun B-Y. 2012. Scapania and Macrodiplophyllum in the Russian Far East. Bot Pac. 01 (1):31–95.
  • Choi SS, Kwon W, Park J. 2020. The complete chloroplast genome of Scapania ampliata Steph., 1897 (Scapaniaceae, Jungermanniales). Mitochondrial DNA B. 5(3):2908–2910.
  • Forrest LL, Wickett NJ, Cox CJ, Goffinet B. 2011. Deep sequencing of Ptilidium (Ptilidiaceae) suggests evolutionary stasis in liverwort plastid genome structure. Plecevo. 144(1):29–43.
  • Heinrichs J, Bombosch A, Feldberg K, Kreier H-P, Hentschel J, Eckstein J, Long D, Zhu R-L, Schäfer-Verwimp A, Schmidt AR, et al. 2012. A phylogeny of the northern temperate leafy liverwort genus Scapania (Scapaniaceae, Jungermanniales). Mol Phylogenet Evol. 62(3):973–985.
  • Huelsenbeck JP, Ronquist F. 2001. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics. 17(8):754–755.
  • Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30(4):772–780.
  • Konstantinova NA, Vilnet AA, Söderström L, Hagborg A, Von Konrat M. 2013. Notes on early land plants today. 14. Transfer of two Macrodiplophyllum species to Douinia (Scapaniaceae, Marchantiophyta). Phytotaxa. 76(3):31–32.
  • Kumar S, Stecher G, Li M, Knyaz C, Tamura K. 2018. MEGA X: molecular evolutionary genetics analysis across computing platforms. Mol Biol Evol. 35(6):1547–1549.
  • Li H. 2013. Aligning sequence reads, clone sequences and assembly contigs with BWA-MEM. arXiv preprint arXiv:1303.3997.
  • Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R. 2009. The sequence alignment/map format and SAMtools. Bioinformatics. 25(16):2078–2079.
  • Myszczyński K, Górski P, Ślipiko M, Sawicki J. 2018. Sequencing of organellar genomes of Gymnomitrion concinnatum (Jungermanniales) revealed the first exception in the structure and gene order of evolutionary stable liverworts mitogenomes. BMC Plant Biol. 18(1):1–12.
  • Söderström L, Hagborg A, Von Konrat M. 2016. Early land plants today: index of liverworts & hornworts 2013–2014. Phytotaxa. 269(3):133–185.
  • Vilnet A, Konstantinova N, Troitsky A. 2010. Molecular insight on phylogeny and systematics of the Lophoziaceae, Scapaniaceae, Gymnomitriaceae and Jungermanniaceae. Arctoa J Bryol. 19(1):31–50.
  • Zerbino DR, Birney E. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18(5):821–829.
  • Zhao Q-Y, Wang Y, Kong Y-M, Luo D, Li X, Hao P. 2011. Optimizing de novo transcriptome assembly from short-read RNA-Seq data: a comparative study. BMC Bioinf. 12(Suppl 14):S2.

Related research

People also read lists articles that other readers of this article have read.

Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.

Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.