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Mitochondrial DNA Part B
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Volume 5, 2020 - Issue 3
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Mitogenome Announcement

Complete chloroplast genome sequence of an alpine rhubarb Rheum likiangense

Mingyu Liua College of Basic Education, National University of Defense Technology, Changsha, ChinaCorrespondence[email protected]
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Renping Xub State Key Laboratory of Grassland Agro-Ecosystem, Institute of Innovation Ecology, Lanzhou University, Lanzhou, ChinaView further author information
Pages 3663-3664 | Received 07 Aug 2020, Accepted 01 Oct 2020, Published online: 03 Nov 2020

References

  • Chen Q, Li Y. 2020. The complete chloroplast genome of Rheum nobile. Mitoch DNA Part B. 5(2):1519–1520.
  • Dierckxsens N, Mardulyn P, Smits G. 2016. NOVO Plasty: de novo assembly of organelle genomes from whole genome data. Nuc Acid Res. 45:e18.
  • Doyle JJ, Doyle CJ. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull. 19:11–15.
  • Fan K, Sun XJ, Huang M, Wang XM. 2016. The complete chloroplast genome sequence of the medicinal plant Rheum palmatum L. Mitoch DNA Part A. 27(4):2935–2936.
  • Hoang DT, Chernomor O, von Haeseler A, Minh BQ, Vinh LS. 2018. UFBoot2: improving the ultrafast bootstrap approximation. Mol Biol Evol. 35(2):518–522.
  • Huang DI, Cronk QC. 2015. Plann: a command-line application for annotating plastome sequences. Appl Plant Sci. 3(8):1500026.
  • Huo X, Wei H, Gao J, Yan Y, Zhang G, Liu M. 2019. The complete chloroplast genome sequence of Rheum tanguticum, an endangered Chinese medicinal plant (Polygonaceae). Mitoch DNA Part B. 4(2):4055–4056.
  • Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30(4):772–780.
  • Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, et al. 2012. Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics. 28(12):1647–1649.
  • Li H, Durbin R. 2009. Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics. 25(14):1754–1760.
  • Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R. 2009. The sequence alignment/map format and SAMtools. Bioinformatics. 25(16):2078–2079.
  • Lohse M, Drechsel O, Kahlau S, Bock R. 2013. OrganellarGenomeDRAW – a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets. Nuc Acid Res. 41:575–581.
  • Luo X, Wang TJ, Hu H, Fan LQ, Wang Q, Hu QJ. 2017. Characterization of the complete chloroplast genome of Oxyria sinensis. Conservation Genet Resour. 9(1):47–50.
  • Sun YS, Wang AL, Wan DS, Wang Q, Liu JQ. 2012. Rapid radiation of Rheum (Polygonaceae) and parallel evolution of morphological traits. Mol Phylogenet Evol. 63(1):150–158.
  • Wang AL, Yang MH, Liu JQ. 2005. Molecular phylogeny, recent radiation and evolution of gross morphology of the rhubarb genus Rheum (polygonaceae) inferred from chloroplast DNA trnL-F sequences. Ann Bot. 96(3):489–498.
  • Xie ZQ. 2000. Studies on certain ecological characteristics of Rheum likiangense in Yushu. Qinghai. Acta Ecol Sin. 20:815–819.
  • Yang BB, Li LD, Liu JQ, Zhang LS. 2020. Plastome and phylogenetic relationship of the woody buckwheat Fagopyrum tibeticum in the Qinghai-Tibet Plateau. Pl Diversity. online:

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