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Rapid Communication

The complete chloroplast genome of Mitreola yangchunensis (Loganiaceae)

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Pages 3794-3795 | Received 26 Jul 2020, Accepted 08 Oct 2020, Published online: 20 Nov 2020

References

  • Doyle JJ, Doyle JL. 1987. A rapid DNA isolation procedure for small amounts of fresh leaf tissue. Phytochem Bull. 19:11–15.
  • Jin JJ, Yu WB, Yang JB,  Song Y, dePamphilis CW, Yi TS, Li DZ. 2018. GetOrganelle: a simple and fast pipeline for de novo assembly of a complete circular chloroplast genome using genome skimming data. bioRxiv, 256479. DOI: 10.1101/256479
  • Katoh K, Misawa K, Kuma K-i, Miyata T. 2002. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res. 30(14):3059–3066.
  • Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, et al. 2012. Geneious basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics. 28(12):1647–1649.
  • Li H-T, Yi T-S, Gao L-M, Ma P-F, Zhang T, Yang J-B, Gitzendanner MA, Fritsch PW, Cai J, Luo Y, et al. 2019. Origin of angiosperms and the puzzle of the Jurassic gap. Nature Plants. 5(5):461–470.
  • Li PT, Leeuwenberg AJM. 1996. Loganiaceae. In: Flora of China Editorial Committee, editors. Flora of China, vol 15. Beijing & St. Louis: Science press & Missouri Botanical Garden Press; p. 320–322.
  • Lowe TM, Chan PP. 2016. tRNAscan-SE on-line: integrating search and context for analysis of transfer RNA genes. Nucleic Acids Res. 44(W1):W54–W57.
  • Ma QX, Xing FW, Ye HG. 2010. Mitreola yangchunensis (Loganiaceae), a new species from China. Pak J Bot. 42(2):685–689.
  • Qu X-J, Moore MJ, Li D-Z, Yi T-S. 2019. PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes. Plant Methods. 15:50.
  • Shan ZJ, Du XL, Ding T, et al. 2019. Mitreola liui sp. nov. (Loganiaceae), a new species from Chongqing, China. Pak. J. Bot. 51(6):2251–2254.
  • Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 30(9):1312–1313.
  • Wang RJ. 2018. Loganiaceae. In: Li DZ, editor. A dictionary of the families and genera of Chinese vascular plants. Beijing: Science press: p. 337.