849
Views
2
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

The complete mitochondrial genome of an endangered tree: Malania oleifera

, , , & ORCID Icon
Pages 3829-3830 | Received 21 Sep 2020, Accepted 20 Oct 2020, Published online: 24 Dec 2020

References

  • Guo FB, Wang SH, Wang J, Zhu F, Chen ZH, Yuan XL. 2018. Fruit yield and characters of wild Malania oleifera, a rare plant species in southwest China. Guihaia. 38(1):57–64.
  • Jin JJ, Yu WB, Yang JB, Song Y, dePamphilis CW, Yi TS, Li DZ. 2019. GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes. BioRxiv: 256479.
  • Katoh K, Misawa K, Kuma K, Miyata T. 2002. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res. 30(14):3059–3066.
  • Kent WJ. 2002. BLAT—the BLAST-like alignment tool. Genome Res. 12(4):656–664.
  • Li H. 2018. Minimap2: pairwise alignment for nucleotide sequences. Bioinformatics. 34(18):3094–3100.
  • Li HG, Li WZ, Deng SK. 2019. The status of germplasm resources, research and utilization of Malania oleifera Chun et S. Lee Ex S. Lee. Forest Sci Technol. 559:10.
  • Lowe TM, Eddy SR. 1997. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25(5):955–964.
  • Lv SH, Wei CG, Huang FZ, He YL, Zeng DJ, Li XK, Deng Z. 2016. Fruit and seed traits and adaptability to rocky desertification mountain of rare tree species Malania oleifera. Chin J Ecol. 35(1):57–62.
  • Ma YP, Chen G, Grumbine RE, Dao ZL, Sun WB, Guo HJ. 2013. Conserving plant species with extremely small populations (PSESP) in China. Biodivers Conserv. 22(3):803–809.
  • Ma BL, Liang SF, Zhao DY, Xu AX, Zhang KJ. 2004. Study on plants containing nervonic acid. Acta Bot Boreali Occident Sin. 24(12):2362.
  • Nguyen LT, Schmidt HA, Von Haeseler A, Minh BQ. 2015. IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol Biol Evol. 32(1):268–274.
  • Slater GSC, Birney E. 2005. Automated generation of heuristics for biological sequence comparison. BMC Bioinformatics. 6(1):31.
  • Stanke M, Schöffmann O, Morgenstern B, Waack S. 2006. Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources. BMC Bioinformatics. 7(1):62.
  • Sun W. 1998. Malania oleifera. The IUCN red list of threatened species 1998:e.T32361A9701100.
  • Xu C-Q, Liu H, Zhou S-S, Zhang D-X, Zhao W, Wang S, Chen F, Sun Y-Q, Nie S, Jia K-H, et al. 2019. Genome sequence of Malania oleifera, a tree with great value for nervonic acid production. GigaScience. 8(2):164.