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Mitogenome Announcement

Characterization of the chloroplast genome of Lagerstroemia villosa Wall. ex Kurz. (Lagerstroemia, Lythraceae)

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Pages 19-20 | Received 30 Sep 2020, Accepted 25 Oct 2020, Published online: 06 Jan 2021

References

  • Beier S, Thiel T, Münch T, Scholz U, Mascher M. 2017. MISA-web: a web server for microsatellite prediction. Bioinformatics. 33(16):2583–2585.
  • Bolger AM, Lohse M, Usadel B. 2014. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics. 30(15):2114–2120.
  • De Wilde W, Duyfjes B. 2016. Survey of Lagerstroemia L. (Lythraceae) in Indochina (excl. Thailand) with the description of Lagerstroemia densiflora, sp. nov., a new species from Vietnam. Adansonia. 38(2):241–255.
  • Doyle J. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull. 19:11–15.
  • Johnson M, Zaretskaya I, Raytselis Y, Merezhuk Y, McGinnis S, Madden TL. 2008. NCBI BLAST: a better web interface. Nucleic Acids Res. 36(Web Server issue):W5–W9.
  • Kalyaanamoorthy S, Minh BQ, Wong TKF, von Haeseler A, Jermiin LS. 2017. ModelFinder: fast model selection for accurate phylogenetic estimates. Nat Methods. 14(6):587–589.
  • Katoh K, Rozewicki J, Yamada KD. 2019. MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization. Brief Bioinform. 20(4):1160–1166.
  • Nicolas D, Patrick M, Guillaume S. 2017. NOVOPlasty: de novo assembly of organelle genomes from whole genome data. Nucleic Acids Res. 45(4):e18.
  • Qin HN, Shirley G. 2007. Punica Linnaeus. Flora of China. Vol. 13. Beijing Science Press: Beijing, China.
  • Wyman SK, Jansen RK, Boore JL. 2004. Automatic annotation of organellar genomes with DOGMA. Bioinformatics. 20(17):3252–3255.
  • Xu C, Dong WP, Li WQ, Lu YZ, Xie XM, Jin XB, Shi JP, He KH, Suo ZL. 2017. Comparative analysis of six Lagerstroemia complete chloroplast genomes. Front Plant Sci. 8:15.
  • Yang JB, Li DZ, Li HT. 2014. Highly effective sequencing whole chloroplast genomes of angiosperms by nine novel universal primer pairs. Mol Ecol Resour. 14(5):1024–1031.
  • Zhang D, Gao F, Jakovlić I, Zou H, Zhang J, Li WX, Wang GT. 2020. PhyloSuite: an integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies. Mol Ecol Resour. 20(1):348–355.