512
Views
1
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

The complete chloroplast genome of Castanopsis mekongensis A. Camus (Fagaceae)

ORCID Icon, , , &
Pages 168-170 | Received 28 Sep 2020, Accepted 19 Nov 2020, Published online: 16 Jan 2021

References

  • Duanmu X. 1996. Comprehensive utilization of Castanopsis resources in China. Forest Chem Newsl. 5:38–40.
  • Gao F, Shen J, Liao F, Cai W, Lin S, Yang H, Chen S. 2018. The first complete genome sequence of narcissus latent virus from Narcissus. Arch Virol. 163(5):1383–1386.
  • Isao M, Motomichi M, Kiyoshi K. 2010. Extensive frameshift at all AGG and CCC codons in the mitochondrial cytochrome c oxidase subunit 1 gene of Perkinsus marinus (Alveolata; Dinoflagellata). Nucleic Acids Res. 38(18):86–94.
  • Jin J-J, Yu W-B, Yang J-B, Song Y, dePamphilis CW, Yi T-S, Li D-Z. 2020. GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes. Genome Biol. 21(1):241.
  • Kalyaanamoorthy S, Minh BQ, Wong TKF, von Haeseler A, Jermiin LS. 2017. ModelFinder: fast model selection for accurate phylogenetic estimates. Nat Methods. 14(6):587–589.
  • Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30(4):772–780.
  • Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, et al. 2012. Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics. 28(12):1647–1649.
  • Nguyen LT, Schmidt HA, von Haeseler A, Minh BQ. 2015. IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol Biol Evol. 32(1):268–274.
  • Osuna-Mascaró C, Rubio de Casas R, Perfectti F. 2018. Comparative assessment shows the reliability of chloroplast genome assembly using RNA-seq. Sci Rep. 8(1):1–12.
  • Xia NH, Tong YH. 1998. Flora Reipublicae Popularis Sinicae. Sci Press. 22: 31.
  • Xue S, Shi T, Luo W, Ni X, Iqbal S, Ni Z, Huang X, Yao D, Shen Z, Gao Z. 2019. Comparative analysis of the complete chloroplast genome among Prunus mume, P. armeniaca, and P. salicina. Hortic Res. 6(1):89.
  • Zhang Y, Zong D, Zhou A, He C. 2019. The complete chloroplast genome of Populus tomentosa narrow crown, native to Northern China. Mitochondrial DNA B. 4(1):1208–1210.