459
Views
0
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

Characterization of the complete mitochondrial genome of Ilisha striatula (Clupeiformes, Pristigasteridae) and phylogenetic studies of Clupeiformes

, , , &
Pages 236-238 | Received 06 Oct 2020, Accepted 30 Nov 2020, Published online: 20 Jan 2021

References

  • Barnett R, Larson G. 2012. A phenol-chloroform protocol for extracting DNA from ancient samples. Methods Mol Biol. 840:13–19.
  • Guindon S, Dufayard JF, Lefort V, Anisimova M, Hordijk W, Gascuel O. 2010. New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0%. J Syst Biol. 59(3):307–321.
  • Hui Z, Xian W. 2015. The complete mitochondrial genome of the larvae Japanese anchovy Engraulis japonicus (Clupeiformes, Engraulidae). Mitochondrial DNA. 26:935–936.
  • Lavoué S, Miya M, Saitoh K, Ishiguro NB, Nishida MJMP. 2007. Phylogenetic relationships among anchovies, sardines, herrings and their relatives (Clupeiformes), inferred from whole mitogenome sequences. Mol Phylogenet Evol. 43(3):1096–1105.
  • Li C, Lu CY, Li JT, Cheng L, Zheng XH, Sun XW. 2014. Complete mitochondrial genome of Amur sturgeon (Acipenser schrenckii). Mitochondrial DNA. 25(4):282–283.
  • Lowe TM, Eddy SR. 1997. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25(5):955–964.
  • Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, Höhna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol. 61(3):539–542.
  • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol. 28(10):2731–2739.
  • Todd M, Lowe, Patricia P. 2016. tRNAscan-SE on-line: integrating search and context for analysis of transfer RNA genes. Nucleic Acid Res. 44(W1):W54–W57.
  • Whitehead PJP. 1985. FAO species catalogue: vol. 7. Clupeoid fishes of the world (Suborder Clupeoidei): an annotated and illustrated catalogue of the herrings, sardines, pilchards, sprats, chads, anchovies and wolf-herrings: 1. Chirocentridae, Clupeidae and Pristigasteridae. London: British Museum.
  • Wongratana T. 1983. Diagnoses of 24 new species and proposal of a new name for a species of Indo-Pacific Clupeoid fishes. Jpn J Ichthyol. 29(4):385–407.
  • Yamaoka K, Nakagawa T, Uno T. 1978. Application of Akaike’s Information Criterion (AIC) in the evaluation of linear pharmacokinetic equations. J Pharmacokinet Biopharm. 6(2):165–175.