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Mitogenome Announcement

The complete plastid genome sequence of Quercus acuta (Fagaceae), an evergreen broad-leaved oak endemic to East Asia

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Pages 320-322 | Received 21 Aug 2020, Accepted 15 Dec 2020, Published online: 03 Feb 2021

References

  • Deng M, Cao LM, Cao M. 2008. A new distribution record of Quercus acuta Thunberg in Hongkong and Guangdong Province. Guihaia. 28:731–734.
  • Deng M, Jiang XL, Hipp AL, Manos PS, Hahn M. 2018. Phylogeny and biogeography of East Asian evergreen oaks (Quercus section Cyclobalanopsis; Fagaceae): insights into the Cenozoic history of evergreen broad-leaved forests in subtropical Asia. Mol Phylogenet Evol. 119:170–181.
  • Dierckxsens N, Mardulyn P, Smits G. 2017. NOVOPlasty: de novo assembly of organelle genomes from whole genome data. Nucleic Acids Res. 45(4):e18.
  • Han EK, Cho WB, Park JS, Choi IS, Kwak M, Kim BY, Lee JH. 2020. A Disjunctive marginal edge of evergreen broad-Leaved oak (Quercus gilva) in East Asia: the high genetic distinctiveness and unusual diversity of Jeju Island populations and insight into a massive, independent postglacial colonization. Genes. 11(10):1114.
  • Hipp AL, Manos PS, Hahn M, Avishai M, Bodénès C, Cavender ‐Bares J, Crowl AA, Deng M, Denk T, Fitz‐Gibbon S, et al. 2020. Genomic landscape of the global oak phylogeny. New Phytol. 226(4):1198–1212.
  • Katoh K, Toh H. 2010. Parallelization of the MAFFT multiple sequence alignment program. Bioinformatics. 26(15):1899–1900.
  • Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, et al. 2012. Geneious basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics. 28(12):1647–1649.
  • Kremer A, Hipp AL. 2020. Oaks: an evolutionary success story. New Phytol. 226(4):987–1011.
  • Lee JH, Choi BH. 2010. Distribution and northernmost limit on the Korean Peninsula of three evergreen trees. Korean J Pl Taxon. 40(4):267–273.
  • Manos PS, Doyle JJ, Nixon KC. 1999. Phylogeny, biogeography, and processes of molecular differentiation in Quercus subgenus Quercus (Fagaceae). Mol Phylogenet Evol. 12(3):333–349.
  • Ohashi H, Ohashi K, Takahashi K. 2006. Identity of Quercus acuta Thunb. (Fagaceae) recorded from Taiwan and China. J Japanese Bot. 81:268–274.
  • Qian H, Ricklefs RE. 2000. Large-scale processes and the Asian bias in species diversity of temperate plants. Nature. 407(6801):180–182.
  • Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 30(9):1312–1313.
  • Yang Y, Zhou T, Duan D, Yang J, Feng L, Zhao G. 2016. Comparative analysis of the complete chloroplast genomes of five Quercus species. Front Plant Sci. 7:959.
  • Zeng QM, Liu B, Lin RQ, Jiang YT, Liu ZJ, Chen SP. 2019. The complete chloroplast genome sequence of Quercus gilva (Fagaceae). Mitochondrial DNA Part B. 4(2):2493–2494.