1,093
Views
4
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

The complete chloroplast genome sequence of Camellia sinensis var. sinensis cultivar Tieguanyin (Theaceae)

ORCID Icon, , , , &
Pages 395-396 | Received 03 Nov 2020, Accepted 20 Dec 2020, Published online: 08 Feb 2021

References

  • Chen MX. 2018. Development status and countermeasure of Tieguanyin industrialization in Anxi. Mod Agric Sci Technol. 15:262–264.
  • Greiner S, Lehwark P, Bock R. 2019. OrganellarGenomeDRAW (OGDRAW) version 1.3.1: expanded toolkit for the graphical visualization of organellar genomes. Nucleic Acids Res. 47(W1):W59–W64.
  • Huang H, Shi C, Liu Y, Mao S-Y, Gao L-Z. 2014. Thirteen Camellia chloroplast genome sequences determined by high-throughput sequencing: genome structure and phylogenetic relationships. BMC Evol Biol. 14:151.
  • Jin J-J, Yu W-B, Yang J-B, Song Y, dePamphilis CW, Yi T-S, Li D-Z. 2020. GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes. Genome Biol. 21(1):241.
  • Katoh K, Standley DM. 2014. MAFFT: iterative refinement and additional methods. In: Russell DJ, editors. Multiple sequence alignment methods. Totowa (NJ): Humana Press; p. 131–146.
  • Lin Y, Yu W, Zhou L, Fan X, Wang F, Wang P, Fang W, Cai C, Ye N. 2020. Genetic diversity of oolong tea (Camellia sinensis) germplasms based on the nanofluidic array of single-nucleotide polymorphism (SNP) markers. Tree Genet Genomes. 16:3.
  • Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 30(9):1312–1313.
  • Tillich M, Lehwark P, Pellizzer T, Ulbricht-Jones ES, Fischer A, Bock R, Greiner S. 2017. GeSeq – versatile and accurate annotation of organelle genomes. Nucleic Acids Res. 45(W1):W6–W11.
  • Wang X, Feng H, Chang Y, Ma C, Wang L, Hao X, Li A, Cheng H, Wang L, Cui P, et al. 2020. Population sequencing enhances understanding of tea plant evolution. Nat Commun. 11(1):4447.
  • Xia E, Tong W, Hou Y, An Y, Chen L, Wu Q, Liu Y, Yu J, Li F, Li R, et al. 2020. The reference genome of tea plant and resequencing of 81 diverse accessions provide insights into genome evolution and adaptation of tea plants. Mol Plant. 13(7):1013–1026.
  • Xia E-H, Zhang H-B, Sheng J, Li K, Zhang Q-J, Kim C, Zhang Y, Liu Y, Zhu T, Li W, et al. 2017. The tea tree genome provides insights into tea flavor and independent evolution of caffeine biosynthesis. Mol Plant. 10(6):866–877.
  • Zhang W, Zhang Y, Qiu H, Guo Y, Wan H, Zhang X, Scossa F, Alseekh S, Zhang Q, Wang P, et al. 2020. Genome assembly of wild tea tree DASZ reveals pedigree and selection history of tea varieties. Nat Commun. 11(1):3719.