References
- Aryal A, Raubenheimer D, Subedi S, Kattel B. 2010. Spatial habitat overlap and habitat preferences of Himalayan Musk Deer (Moschus chrysogaster) in Sagarmatha (Mt. Everest) National Park, Nepal. Curr Res J Biol Sci. 2:217–225.
- Hahn C, Bachmann L, Chevreux B. 2013. Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads—a baiting and iterative mapping approach. Nucl Acids Res. 41(13):e129–e129.
- Harris R. 2016. Moschus chrysogaster. The IUCN red list of threatened species. [accessed 2020 Nov 24]. https://dx.doi.org/10.2305/IUCN.UK.2016-1.RLTS.T13895A61977139.en
- Hassanin A, Douzery EJ. 2003. Molecular and morphological phylogenies of Ruminantia and the alternative position of the Moschidae. Syst Biol. 52(2):206–228.
- Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, et al. 2012. Geneious basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics. 28(12):1647–1649.
- Kim SI, Lee MY, Jeon HS, Han SH, An J. 2017. Complete mitochondrial genome of Siberian musk deer Moschus moschiferus (Artiodactyla: Moschidae) and phylogenetic relationship with other moschus species. Mitochondrial DNA Part B. 2(2):860–861.
- Lanfear R, Calcott B, Ho SY, Guindon S. 2012. Partitionfinder: combined selection of partitioning schemes and substitution models for phylogenetic analyses. Mol Biol Evol. 29(6):1695–1701.
- Meng XX, Yang QS, Xia L, Feng ZJ, Jiang YW, Wang PM. 2003. The temporal estrous patterns of female alpine musk deer in captivity. Appl Anim Behav Sci. 82(1):75–85.
- Mithileshwari C, Srivastava T, Kumar V, Kumar A, Umapathy G. 2016. Non-invasive assessment of fecal progestagens and pregnancy detection in Himalayan musk deer (Moschus chrysogaster). Theriogenology. 85(2):216–223.
- Pan T, Wang H, Hu CC, Sun ZL, Zhu XX, Meng T, Meng XX, Zhang BW. 2015. Species delimitation in the genus Moschus (Ruminantia: Moschidae) and its high-plateau origin. PLOS One. 10(8):e0134183.
- Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, Höhna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol. 61(3):539–542.
- Singh B, Gautam KB, Sahoo S, Kumar A, Gupta SK. 2020. Complete mitogenome of Kashmir musk deer (Moschus cupreus) and its comparative phylogenetic relationships. Mol Biol Rep. 47(12):9757–9763.
- Stamatakis A. 2006. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics. 22(21):2688–2690.
- Su B, Wang YX, Lan H, Wang W, Zhang YP. 1999. Phylogenetic study of complete cytochrome b genes in musk deer (genus Moschus) using museum samples. Mol Phylogenet Evol. 12(3):241–249.
- Wemmer C. 1998. Deer status survey and conservation action plan. Gland, Switzerland and Cambridge: IUCN.
- Yang C, Tang J, Bian K, Suo LJ, Yuan H, Wang Y, Huang Y. 2018. Next generation sequencing yields the complete mitogenome of captive forest musk deer, Moschus berezovskii (Ruminantia: Moschidae). Mitochondrial DNA Part B. 3(2):472–473.
- Yang CZ, Xiang CK, Zhang XY, Yue BS. 2013. The complete mitochondrial genome of the Alpine musk deer (Moschus chrysogaster). Mitochondrial DNA Part A. 24(5):501–503.