Advanced search
Publication Cover
Mitochondrial DNA Part B
Resources
Volume 6, 2021 - Issue 4
Submit an article Journal homepage
713
Views
2
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

The complete mitochondrial genome of soft coral Sinularia penghuensis Ofwegen and Benayahu, 2012 (Octocorallia: Alcyonacea): the analysis of mitogenome organization and phylogeny

Chun-Yang Shena Department of Biology, Chengde Medical University, Hebei Province, Chengde, PR ChinaCorrespondence[email protected]
View further author information
,
Pei-Zheng Wangb College of Ecology and Environment, Hainan Tropical Ocean University, Sanya, PR ChinaCorrespondence[email protected]
View further author information
,
Wei Xuec Department of Chemical Engineering, Chengde Petroleum College, Chengde, PR ChinaView further author information
,
Zhao-Hui Liua Department of Biology, Chengde Medical University, Hebei Province, Chengde, PR ChinaView further author information
,
Jing-Yi Zhaod Department of Functional Center, Chengde Medical University, Hebei Province, Chengde, PR ChinaView further author information
,
Xiao-Bo Tonge Hemorheology Center, Chengde Medical University, Hebei Province, Chengde, PR ChinaView further author information
,
Chunwei Liub College of Ecology and Environment, Hainan Tropical Ocean University, Sanya, PR ChinaView further author information
,
Xiao-Fang Wub College of Ecology and Environment, Hainan Tropical Ocean University, Sanya, PR ChinaView further author information
,
Xiaonan Maoa Department of Biology, Chengde Medical University, Hebei Province, Chengde, PR ChinaView further author information
,
Sihan Tiana Department of Biology, Chengde Medical University, Hebei Province, Chengde, PR ChinaView further author information
&
Chunzheng Fuf Institute of Sericulture, Chengde Medical University, Hebei Province, Chengde, PR ChinaView further author information
 show all
Pages 1348-1350 | Received 29 Nov 2020, Accepted 16 Mar 2021, Published online: 08 Apr 2021

References

  • Asem A, Lu H, Wang PZ, Li WD. 2019. The complete mitochondrial genome of Sinularia ceramensis Verseveldt, 1977 (Octocorallia: Alcyonacea) using next-generation sequencing. Mitochondrial DNA Part B. 4(1):815–816.
  • Bankevich A, Nurk S, Antipov D, Gurevich AA, Dvorkin M, Kulikov AS, Lesin VM, Nikolenko SI, Pham S, Prjibelski AD, et al. 2012. Spades: a new genome assembly algorithm and its applications to single-cell sequencing. J Comput Biol. 19(5):455–477.
  • Baums IB. 2008. A restoration genetics guide for coral Reef conservation. Mol Ecol. 17(12):2796–2811.
  • Boore JL. 2001. Complete mitochondrial genome sequence of the polychaete annelid Platynereis dumerilii. Mol Biol Evol. 18(7):1413–1416.
  • Brockman SA, Mcfadden CS. 2012. The mitochondrial genome of Paraminabea aldersladei (cnidaria: Anthozoa: Octocorallia) supports intramolecular recombination as the primary mechanism of gene rearrangement in octocoral mitochondrial genomes. Genome Biol Evol. 4(9):994–1006.
  • Chen Y, Dan Y-T, Lu H, Wang P-Z, Asem A, Li W. 2019. The complete mitochondrial genome of Sinularia maxima Verseveldt, 1971 (Octocorallia: Alcyonacea) using next-generation sequencing. Mitochondrial DNA Part B. 4(2):3425–3426.
  • Figueroa DF, Baco AR. 2015. Octocoral mitochondrial genomes provide insights into the phylogenetic history of gene order rearrangements, order reversals, and Cnidarian phylogenetics. Gen Biol Evol. 7(1):391–409.
  • Kayal E, Roure B, Philippe H, Collins AG, Lavrov DV. 2013. Cnidarian phylogenetic relationships as revealed by mitogenomics. BMC Evol Biol. 13:5.
  • Keller NB, Oskina NS, Savilova TA. 2017. Distribution of deep-water Scleractinian corals in the Atlantic Ocean. Oceanology. 57(2):298–305.
  • Lakshmi V, Kumar R. 2009. Metabolites from Sinularia species. Nat Prod Res. 23(9):801–850.
  • Langmead B, Salzberg SL. 2012. Fast gapped-read alignment with Bowtie 2. Nat Methods. 9(4):357–359.
  • Medina M, Collins A, Takaoka T, Kuehl J, Boore J. 2006. Naked corals: skeleton loss in Scleractinia. Proc Natl Acad Sci USA. 103(24):9096–9100.
  • Shen CY, Dan YT, Asem A, Wang PZ, Xue W, T XB, Li WD. 2019. The complete mitochondrial genome of soft coral Sarcophyton trocheliophorum (Cnidaria: Anthozoa) using next-generation sequencing. Mitochondrial DNA Part B. 4(2):3734–3735.
  • Shimpi GG, Vargas S, Poliseno A, Worheide G. 2017. Mitochondrial RNA processing in absence of tRNA punctuations in octocorals. BMC Mol Biol. 18(1):16.

Related research

People also read lists articles that other readers of this article have read.

Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.

Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.