503
Views
1
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

Characterization of the complete chloroplast genome of Pterocarya macroptera var. delavayi (Juglandaceae)

, , , &
Pages 1344-1345 | Received 18 Jan 2021, Accepted 18 Mar 2021, Published online: 05 Apr 2021

References

  • Bolger AM, Lohse M, Usadel B. 2014. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics. 30(15):2114–2120.
  • Doyle JJ. 1987. A rapid DNA isolation procedure for small amounts of fresh leaf tissue. Phytochem Bull. 19:11–15.
  • Jin JJ, Yu WB, Yang JB, Song Y, dePamphilis CW, Yi TS, Li DZ. 2020. GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes. Genome Biol. 21(1):241.
  • Katoh K, Toh H. 2010. Parallelization of the MAFFT multiple sequence alignment program. Bioinformatics. 26(15):1899–1900.
  • Lu AM, Stone DE, Grauke LJ. 1999. Juglandaceae. In: Wu ZY, Raven PH, editors. Flora of China, Vol. 4. Beijing, China: Science Press & Missouri Botanical Garden Press; p. 277–285.
  • Mu XY, Tong L, Sun M, Zhu YX, Wen J, Lin QW, Liu B. 2020. Phylogeny and divergence time estimation of the walnut family (Juglandaceae) based on nuclear RAD-Seq and chloroplast genome data. Mol Phylogenet Evol. 147:106802.
  • Ronquist F, Huelsenbeck JP. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics. 19(12):1572–1574.
  • Song YG, Li Y, Meng HH, Fragnière Y, Ge BJ, Sakio H, Yousefzadeh H, Bétrisey S, Kozlowski G. 2020. Phylogeny, taxonomy, and biogeography of Pterocarya (Juglandaceae). Plants. 9(11):1524.
  • Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 30(9):1312–1313.
  • Xiang XG, Wang W, Li RQ, Lin L, Liu Y, Zhou ZK, Li ZY, Chen ZD. 2014. Large-scale phylogenetic analyses reveal fagalean diversification promoted by the interplay of diaspores and environments in the Paleogene. Perspect Plant Ecol. 16(3):101–110.
  • Ying TS, Chen ML. 2011. Plant geography of China. Shanghai, China: Shanghai Scientific & Technical Publishers; p. 141.