934
Views
0
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

Analysis of Cucurbita ficifolia (Cucurbitaceae) chloroplast genome and its phylogenetic implications

, , , , &
Pages 3033-3035 | Received 26 Mar 2021, Accepted 16 Jul 2021, Published online: 24 Sep 2021

References

  • Arriaga L, Huerta E, Lira-Saade R, Moreno E, Alarcón J. 2006. Assessing the risk of releasing transgenic Cucurbita spp. in Mexico. Agr Ecosyst Environ. 112(4):291–299.
  • Jin JJ, Yu WB, Yang JB, Song Y, Yi TS, Li DZ. 2018. GetOrganelle: a simple and fast pipeline for de novo assembly of a complete circular chloroplast genome using genome skimming data. BioRxiv. 4:256479.
  • Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30(4):772–780.
  • Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, et al. 2012. Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics. 28(12):1647–1649.
  • Kim KM, Kim CK, Han JS. 2010. In vitro regeneration from cotyledon explants in figleaf gourd (Cucurbita ficifolia Bouch), a rootstock for Cucurbitaceae. Plant Biotechnol Rep. 4(2):101–107.
  • Lam-Tung N, Schmidt HA, Arndt VH, Quang MB. 2015. IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol Biol Evol. 32(1):268–274.
  • Lee JM, Oda M. 2003. Grafting of herbaceous vegetable and ornamental crops. Hort Rev. 28:61–124.
  • Liu C, Shi L, Zhu Y, Chen H, Zhang J, Lin X, Guan X. 2012. CpGAVAS, an integrated web server for the annotation, visualization, analysis, and GenBank submission of completely sequenced chloroplast genome sequences. BMC Genomics. 13(1):715.
  • Roxas VP. 1994. Cucurbita ficifolia Bouché. In: Siemonsma JS, Piluek K, editors. Plant resources of South-East Asia 8 vegetables, Bogor Indonesia. Wageningen: Pudoc; p. 165–167.