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Mitogenome Announcement

The complete chloroplast genome of Petunia exserta (Solanaceae: Petunioideae), an endangered ornamental species

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Pages 2619-2621 | Received 19 May 2021, Accepted 28 Jul 2021, Published online: 10 Aug 2021

References

  • Ando T, Kokubun H, Watanabe H, Tanaka N, Yukawa T, Hashimoto G, Marchesi E, Suaréz E, Basualdo IL. 2005. Phylogenetic analysis of Petunia sensu Jussieu (Solanaceae) using chloroplast DNA RFLP. Ann Bot. 96(2):289–297.
  • Doyle JJ, Doyle JL. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull. 19:11–15.
  • Jin JJ, Yu WB, Yang JB, Song Y, dePamphilis C, Yi TS, Li DZ. 2020. GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes. Genome Biol. 21(1):241.
  • Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30(4):772–780.
  • Klahre U, Gurba A, Hermann K, Saxenhofer M, Bossolini E, Guerin PM, Kuhlemeier C. 2011. Pollinator choice in petunia depends on two major genetic loci for floral scent production. Curr Biol. 21(9):730–739.
  • Koressaar T, Remm M. 2007. Enhancements and modifications of primer design program Primer3. Bioinformatics. 23(10):1289–1291.
  • Kulcheski FR, Muschner VC, Lorenz-Lemke AP, Stehmann JR, Bonatto SL, Salzano FM, Freitas LB. 2006. Molecular phylogenetic analysis of Petunia Juss. (Solanaceae). Genetica. 126(1–2):3–14.
  • Liu G, Sun M, Zou P, Zhang W, Ni J. 2020. The complete chloroplast genome sequence of a popular ornamental plant Calibrachoa hybrida (Solanaceae: Petunioideae). Mitochondrial DNA B Resour. 5(3):3374–3393.
  • Lorenz-Lemke AP, Mäder G, Muschner VC, Stehmann JR, Bonatto SL, Salzano FM, Freitas LB. 2006. Diversity and natural hybridization in a highly endemic species of Petunia (Solanaceae): a molecular and ecological analysis. Mol Ecol. 15(14):4487–4497.
  • Lorenz-Lemke AP, Togni PD, Mäder G, Kriedt RA, Stehmann JR, Salzano FM, Bonatto SL, Freitas LB. 2010. Diversification of plant species in a subtropical region of eastern South American highlands: a phylogeographic perspective on native Petunia (Solanaceae). Mol Ecol. 19(23):5240–5251.
  • Segatto ALA, Cazé ALR, Turchetto C, Klahre U, Kuhlemeier C, Bonatto SL, Freitas LB. 2014. Nuclear and plastid markers reveal the persistence of genetic identity: a new perspective on the evolutionary history of Petunia exserta. Mol Phylogenet Evol. 70:504–512.
  • Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 30(9):1312–1313.
  • Tillich M, Lehwark P, Pellizzer T, Ulbricht-Jones ES, Fischer A, Bock R, Greiner S. 2017. GeSeq - versatile and accurate annotation of organelle genomes . Nucleic Acids Res. 45(W1):W6–W11.
  • Untergasser A, Cutcutache I, Koressaar T, Ye J, Faircloth CB, Remm M, Rozen GS. 2012. Primer3-new capabilities and interfaces. Nucleic Acids Res. 40 (15):e115.
  • Watanabe H, Ando T, Tsukamoto T, Hashimoto G, Marchesi E. 2001. Cross compatibility of Petunia exserta with other Petunia taxa. Engei Gakkai Zasshi. 70(1):33–40.
  • Wong J, Mudd EA, Hayes A, Day A. 2019. The chloroplast genome sequence of the ornamental plant Petunia hybrida. Mitochondrial DNA Part B. 4(1):249–250.