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Mitochondrial DNA Part B
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Volume 6, 2021 - Issue 10
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Mitogenome Announcement

The complete chloroplast genome of a shrub species, Smilax glabra (Smilacaceae) from Guangdong, China

Yi Zhanga School of nursing, Chongqing Medical and Pharmaceutical College, Chongqing, P. R. ChinaORCID Iconhttps://orcid.org/0000-0002-7475-9947View further author information
ORCID Icon,
Ying Liua School of nursing, Chongqing Medical and Pharmaceutical College, Chongqing, P. R. ChinaView further author information
,
Qijin Geb BGI Education Center, University of Chinese Academy of Sciences, Shenzhen, P. R. ChinaView further author information
,
Kai Hanc BGI-Qingdao, BGI-Shenzhen, Qingdao, P. R. ChinaORCID Iconhttps://orcid.org/0000-0002-3061-1895View further author information
ORCID Icon,
Chengcheng Shid School of Future Technology, University of Chinese Academy of Sciences, Beijing, P. R. ChinaORCID Iconhttps://orcid.org/0000-0003-2154-5491View further author information
ORCID Icon &
Xin Liue BGI-Fuyang, BGI-Shenzhen, Fuyang, P. R. ChinaCorrespondence[email protected]
ORCID Iconhttps://orcid.org/0000-0003-3256-2940View further author information
ORCID Icon
Pages 3064-3066 | Received 01 Jul 2021, Accepted 07 Sep 2021, Published online: 27 Sep 2021

References

  • Chen T, Li JX, Cai Y, Xu Q. 2002. A flavonol glycoside from Smilax glabra. Chin Chem Lett. 13:537–538.
  • Commission, Chinese Pharmacopoeia. 2015. Pharmacopoeia of the People’s Republic of China. Beijing: China Medical Science Press.
  • Dierckxsens N, Mardulyn P, Smits G. 2017. NOVOPlasty: de novo assembly of organelle genomes from whole genome data. Nucleic Acids Res. 45(4):e18.
  • Do HDK, Kim C, Chase MW, Kim JH. 2020. Implications of plastome evolution in the true lilies (monocot order Liliales). Mol Phylogenet Evol. 148:106818.
  • GBIF. 2020. Smilax glabra Roxb. in GBIF Secretariat 2019. GBIF Backbone Taxonomy. [accessed via GBIF.org, 02-18]. Checklist dataset
  • Hahn C, Bachmann L, Chevreux B. 2013. Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads–a baiting and iterative mapping approach. Nucleic Acids Res. 41(13):e129.
  • Katoh K, Asimenos G, Toh H. 2009. Multiple alignment of DNA sequences with MAFFT. Methods Mol Biol. 537:39–64.
  • Li DZ, Gao LM, Li HT, Wang H, Ge XJ, Liu JQ, Chen ZD, Zhou SL, Chen SL, Yang JB, et al. 2011. Comparative analysis of a large dataset indicates that internal transcribed spacer (ITS) should be incorporated into the core barcode for seed plants. Proc Natl Acad Sci U S A. 108(49):19641–19646.
  • Sa F, Gao JL, Fung KP, Zheng Y, Lee SM, Wang YT. 2008. Anti-proliferative and pro-apoptotic effect of Smilax glabra Roxb. extract on hepatoma cell lines. Chem Biol Interact. 171(1):1–14.
  • Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 30(9):1312–1313.
  • Tillich M, Lehwark P, Pellizzer T, Ulbricht-Jones ES, Fischer A, Bock R, Greiner S. 2017. GeSeq – versatile and accurate annotation of organelle genomes. Nucleic Acids Res. 45(W1):W6–W11.
  • Wang ZT, Hao H, Lin LZ, Yu Y, Li SY. 2014. Identification of Smilax glabra and its related species based on psbA-trnH sequence. Zhong Yao Cai. 37(8):1368–1371.
  • Wu ZY, Raven PH. 2000. Flora of China. (Flagellariaceae through Marantaceae). Vol. 24. St. Louis: Science Press, Beijing and Missouri Botanical Garden Press.
  • Yuan JZ, Dou DQ, Chen YJ, Li W, Kazuo K, Tamotsu N, Yao XS. 2004. Studies on dihydroflavonol glycosides from rhizome of Smilax glabra. Zhongguo Zhong Yao Za Zhi. 29:867–870.

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