References
- Dierckxsens N, Mardulyn P, Smits G. 2017. NOVOPlasty: de novo assembly of organelle genomes from whole genome data. Nucleic Acids Res. 45(4):e18.
- Dierckxsens N, Mardulyn P, Smits G. 2020. Unraveling heteroplasmy patterns with NOVOPlasty. NAR Genom Bioinform. 2(1):lqz011.
- Katoh K, Standley D. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30(4):772–780.
- Kalyaanamoorthy S, Minh BQ, Wong TKF, von Haeseler A, Jermiin LS. 2017. ModelFinder: fast model selection for accurate phylogenetic estimates. Nat Methods. 14(6):587–589.
- Nguyen LT, Schmidt HA, von Haeseler A, Minh BQ. 2015. IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol Biol Evol. 32(1):268–274.
- Li J, Wang S, Yu J, Wang L, Zhou SL. 2013. A modified CTAB protocol for plant DNA extraction. Chin Bull Botany. 48:72–78.
- Prunus glandulosa. 1929. Bulletin of popular information. Vol. 3(5), Boston (MA): Arnold Arboretum, Harvard University; p: 20.
- Qu X-J, Moore MJ, Li D-Z, Yi T-S. 2019. PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes. Plant Methods. 15:50–12.