886
Views
0
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

The complete mitochondrial genome of the forest crested lizard, Calotes emma (Squamata, Agamidae) in China by the next generation sequencing

, , &
Pages 141-143 | Received 27 Jul 2021, Accepted 15 Nov 2021, Published online: 19 Dec 2021

References

  • Agarwala BK, Majumder J. 2015. Calotes emma Gray, 1845 (Squamata: Agamidae): range extension and new addition to the reptilian fauna of Tripura, northeast India. Check List. 11(2):1562.
  • Amarasinghe AAT, Karunarathna DMSS, Fujinuma J. 2014. A new Calotes species from Sri Lanka with a redescription of Calotes liolepis Boulenger, 1885. Herpetologica. 70 (3):323–338.
  • Amarasinghe AAT, Karunarathna DMSS, Hallermann J, Fujinuma J, Grillitsch H, Campbell PD. 2014. A new species of the genus Calotes (Squamata: Agamidae) from high elevations of the Knuckles Massif of Sri Lanka. Zootaxa. 3785 (1):59–78.
  • Amer SA, Kumazawa Y. 2007. The mitochondrial genome of the lizard Calotes versicolor and a novel gene inversion in South Asian draconine agamids. Mol. Biol. E. 24 (6):1330–1339.
  • Bankevich A, Nurk S, Antipov D, Gurevich A, Dvorkin M, Kulikov AS, Lesin V, Nikolenko S, Pham S, Prjibelski A, et al. 2012. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J Comput Biol. 19(5):455–477.
  • Bernt M, Donath A, Jühling F, Externbrink F, Florentz C, Fritzsch G, P€Utz J, Middendorf M, Stadler PF. 2013. MITOS: improved de novo metazoan mitochondrial genome annotation. Mol Phylogenet Evol. 69(2):313–319.
  • Chan-Ard T, Parr JWK, Nabhitabhata J. 2015. A field guide to the reptiles of Thailand. Oxford University Press, New York.
  • Hartmann T, Geissler P, Poyarkov NA, Ihlow F, Galoyan EA, Rödder D, Böhme W. 2013. A new species of the genus Calotes Cuvier, 1817 (Squamata: Agamidae) from southern Vietnam. Zootaxa. 3599:246–260.
  • Krishnan S. 2008. New species of Calotes (Reptilia: Squamata: Agamidae) form the Southern Western Ghats, India. J Herpetol. 42(3):530–535.
  • Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, H€Ohna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol. 61(3):539–542.
  • Rubinstein ND, Feldstein T, Shenkar N, Botero-Castro F, Griggio F, Mastrototaro F, Delsuc F, Douzery EJP, Gissi C, Huchon D. 2013. Deep sequencing of mixed total DNA without barcodes allows efficient assembly of highly plastic ascidian mitochondrial genomes. Genome Biol Evol. 5(6):1185–1199.
  • Saijuntha W, Tantrawatpan C, Pilap W, Sedlak S, Sakdakham K, Sripirom P, Suksavate W, Kongbuntad W,T awong W. 2020. Genetic differentiation of the forest crested lizards, Calotes emma alticristatus Schmidt, 1925 and C. emma emma Gray, 1845 (Squamata: Agamidae) relating to climate zones in Thailand.Asian Herpetological Research,11(1):19–27.
  • Vindum JV, Win H, Thin T, Lwin KS, Shein AK, Tun H. 2003. A new Calotes (Squamata: Agmidae) from the Indo-Burman range of western Myanmar (Burma). Proc Calif Acad Sci. 54(1):1–16.
  • Wang M, Jiang Z, Wang J, Cui L, Zhang M. 2020. The complete mitochondrial genome of the blue-crested lizard, Calotes mystaceus (Squamata, Agamidae) in China. Mitochondrial DNA B Resour. 5 (3):3530–3531.
  • Yuan S, Yun X, Zheng Y, Zeng XM. 2016. Next-generation sequencing of mixed genomic DNA allows efficient assembly of rearranged mitochondrial genomes in Amolops chunganensis and Quasipaa boulengeri. Peerj. 4(3):e2786.
  • Zhao EM, Zhao KT, Zhou KY, et al. 1999. Fauna Sinica, Rep-tilia, Vol. 2: Squamata, Lacertilia. Beijing: Science Press.
  • Zug GR, Brown HHK, Schulte JA, II, Vindum JV. 2006. Systematics of the garden lizards, Calotes versicolor Group (Reptilia, Squamata, Agamidae), in Myanmar: central dry zone populations. Proc Calif Acad Sci. 57(2):35–68.